Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3047 ATGTCTGGAAAGGGTTTGAAATCTATGAAAGATGAAAAGCAAGATTTGCAGAAGCAGATTGGGTGTATCACTGGATTTTTTCAGCTCTTTGATCGCCACCGTTTCATCACAGGTCAACAATCTAGCAGATACATTCAAAATGCATCTTCTTCAGGTGTAACCAACAATTGTACCAAAGAGCTTAATAGTACAATACAGAAACCAAAGGCAAAGAATCAAAATAATGCAAAAGAGAAGCAACAATTTTCGACAGAGTCGTCTATAACTTCTGTCTCTTCATCTTGTTCATCTAGCTTGTCATCCATTGAGTTCAATGCAATAATTAAGACAAAATCACCATCAACCAAACCAATCCAAATTCCAAAAAAACCACATTCAAGACAACAATCACTTGATTTCTGTGATATTGTCAAAGATTCAATGCATAGAGAAGCTAAGGGATTATATGTGAATACATTAACCAAAGAAGAAAAAAATGGTCAAGCTTATGCATTGAATCGACACATAGACTCTCCAAGGCCTATGCTATCTCAAAACTTTGTCAATGCAAGAGTTACGGCTTCAAATGAACCATTACATACTCTTTCAAGGTCGAAAAAATCACATTGGGACTCGCCACGACTCTCTTATGATGCATTGAAATCCACCACAAGGAATAAGGAACTTCCTAGGTTTTCCTTGGACAGCAAGCAAGGATCCATTAGAGGGATCGAAGGAGGAAACAAGGCTCGCAATCTGTTGAATGGTGCACAAAGAGGGTATGAGAGGAACTCGAGCGCAATGCTTAATAAACTGCAAGAACCAGAAACATCAAGAAGATCAACGAGTGTTGTAGCTAAGTTGATGGGACTAGAAGTTCTCCCGGACTCAACACAAACTTGTCAGACTTCTATCTGCTCCGTCGATAAAAAGGAGCTCATGGAAAGAACTAGCATAAGTGGTGAATCCAAGAAACACCAAAGTTCAGTGTCCCCAAGAAATAGAAGGGGTGATGATTCAATCACAAATGTGAAACCTTGTTCGCAATTTGCACTAGAACCAACTACTCCTTGGAGGCAACCTGATGCAGGCCAAAGTTCTTTGTTACAAGATTCTTCAAAGGGAAGTGATTCTGATATAAAAGCATCAAAGCCTTCCCTTTCTGTATATGGCGAAATTGAGCAAAGGCTGACGGAACTCGAGTTCAAAAAGTCCGGAAAGGATCTCAGAGCACTTAAACATATCCTTGAAGCAATGCAGAGATTTACTGATTCATCATCTGACACTAGGAATAATAATACTAGTGTATGTGAAAATTCAAAAGTTCAAAGTCCAAGAATCCAACAAAAGGACTCTCGCTCGGAAACTACCACAGTTGAGCTGTCAAACTCGATCAAGGGTAGCAAATCACCAATTGTCATCGTGAAACCAACAAAAGTAACTAGAAAAGCCAATAATCCCGCTTCTACAGAATTGTCAATTAATGATAAATCTTGTATCAGCAAATGTTCTTCAACAAATGGAAGATTGGTTGATAAACAAAAAGTTAAAGGTATTGTTTCCACAACAAAAAATACCAAGGACCCTTTTGGTCAAAATGTTCCTTCCAAATTGATGCAATCATCAAAATCTTTCCAAGAAAGCAATCAAAAAAACACCATCAACTCTGGCAGCATAACAGAAACTGAGAGTCCAAGACTACAGAAGAAGTTTGGATTTGAGAGGCGTTCTCCGCCAACTAGTCCATCATCAGATTCCACCATTAACAGAAGACAGTATAATAGACAGCAGAAATTCTCTATTTTGCAGGACGGAGATGAACATTTTAGTGACATGAGGAACTTTAAGCACCGTGTTAATGTCATTTTTGAAAATTTTGATAGTAACAGAAGCTTGGACGCTCGAAGTGACATAGAAGTCATTCGAATCGATCAATCGGCAAATATCAATCAAAATAATGCATTTGAAGAGGTGAGTCAGGAAAGCTCTGAAGCTGATAAAATTGTCACTGCTGAACAGCCAAGTCCTGTATCTGTTCTAGATGCTGCATTCTATAAGGAAGATCCACCATCTCCGGTGAAAAAGCAATCGAGCGTTTCAAAATATTTAGGTGAAGCTCTAAGCACTGATGATAGTGAGGAGAACACAGTGGCTCAAATTCTGCAAGAAATTGACCAGATTGATGAGGAACTCATCGATTTTGATAACATCAAGAATCCTGATCATAAGTATATATCAGAAATACTCATAGCATCAGGTCTAGTCAGTGACCGAAACTCTAACCAGATACTTCATTCACATGGCCACTTGATTAATCCAAAGTTATTCTTTGCACTTGAACAAGTAAAGACAAATAAGGTGCATTTCAATATCAAAGATGACGCCGAGAAAATTCACAGGGCTTTTAGTTCTGAGAAAATGCAAAGAAAACTCATATTTGATGTTGTTACTGACATGTTAGTTAACAAATTGATATATCAGACTTCTTCTAGAAAGCTAAAAGGGAAGCGGCTTTTCGAAGAGTTATGTACAGAAATAGACGAGTTACAACCTCCAAATATGAACGACAGCAATGTTCATGAGGATGAGAATTTGACAAGTCTATTGTGCAGAGATTTGAAAAATAACAACACAATTTGGACTAATTGTGGCAGTGAGAAACCGAATATCGTGTTGGATATCGAACGGTCAATCTTTAAAGATTTGATAACTGAAGTTTGTGACAGATGA 2709 0.3795 MSGKGLKSMKDEKQDLQKQIGCITGFFQLFDRHRFITGQQSSRYIQNASSSGVTNNCTKELNSTIQKPKAKNQNNAKEKQQFSTESSITSVSSSCSSSLSSIEFNAIIKTKSPSTKPIQIPKKPHSRQQSLDFCDIVKDSMHREAKGLYVNTLTKEEKNGQAYALNRHIDSPRPMLSQNFVNARVTASNEPLHTLSRSKKSHWDSPRLSYDALKSTTRNKELPRFSLDSKQGSIRGIEGGNKARNLLNGAQRGYERNSSAMLNKLQEPETSRRSTSVVAKLMGLEVLPDSTQTCQTSICSVDKKELMERTSISGESKKHQSSVSPRNRRGDDSITNVKPCSQFALEPTTPWRQPDAGQSSLLQDSSKGSDSDIKASKPSLSVYGEIEQRLTELEFKKSGKDLRALKHILEAMQRFTDSSSDTRNNNTSVCENSKVQSPRIQQKDSRSETTTVELSNSIKGSKSPIVIVKPTKVTRKANNPASTELSINDKSCISKCSSTNGRLVDKQKVKGIVSTTKNTKDPFGQNVPSKLMQSSKSFQESNQKNTINSGSITETESPRLQKKFGFERRSPPTSPSSDSTINRRQYNRQQKFSILQDGDEHFSDMRNFKHRVNVIFENFDSNRSLDARSDIEVIRIDQSANINQNNAFEEVSQESSEADKIVTAEQPSPVSVLDAAFYKEDPPSPVKKQSSVSKYLGEALSTDDSEENTVAQILQEIDQIDEELIDFDNIKNPDHKYISEILIASGLVSDRNSNQILHSHGHLINPKLFFALEQVKTNKVHFNIKDDAEKIHRAFSSEKMQRKLIFDVVTDMLVNKLIYQTSSRKLKGKRLFEELCTEIDELQPPNMNDSNVHEDENLTSLLCRDLKNNNTIWTNCGSEKPNIVLDIERSIFKDLITEVCDR* 903
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3047 902 MobiDBLite consensus disorder prediction 327 376 - -
Tpr6g3047 902 Pfam DUF761-associated sequence motif 272 291 IPR032795 -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 416 456 - -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 309 376 - -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 534 558 - -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 309 326 - -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 570 589 - -
Tpr6g3047 902 Pfam Domain of unknown function (DUF4378) 734 898 IPR025486 -
Tpr6g3047 902 PANTHER LONGIFOLIA PROTEIN 710 900 - -
Tpr6g3047 902 PANTHER LONGIFOLIA PROTEIN 1 708 - -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 64 84 - -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 254 276 - -
Tpr6g3047 902 MobiDBLite consensus disorder prediction 534 589 - -
Tpr6g3047 902 PANTHER LONGIFOLIA PROTEIN 710 900 IPR033334 GO:0051513
Tpr6g3047 902 PANTHER LONGIFOLIA PROTEIN 1 708 IPR033334 GO:0051513
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3047 Tpr-Chr6 33100808 33106752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3047 1 900 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 29.400 1.57e-73 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3047 - - cam:101511032 989.178