Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3044 ATGGTAAAAATTGATGAATCTCTAGATGTTGATTCGAATGAAGTTAGTTCAACCGATAGTCATACATCTGATGATGAGGATTCCAGCTATTCGGTGTCCGGTGGGCATGATAGGTCAGATGATGGCGATGATACTGGTGACCACCATGATGATGATGATGATGGTGATGATGATGATGATGATGATGATGATGATGATGATGATGATGATGACCATGATTTTGGTGATGAAGCATCTATAGGTGAAAGAGCGGTACGTATTAATTCTATGACTGCTGATGAAATTCGTGGTATGGAATTTGGTAGTGTTGACGAAGCTTATGAATTTTATTATCAATACGGTAAATGTAAAGGTTTTTCCGTTAGGAAAAGTGATGATAAGAAAAAAATAGGGCCTGATGGTAGTAAAATAATAACAAACAAGCTTTTTGTATGCAGTAGACAAGGTTTACGAGATAAGAGACACATATCTAGGTTAGATAGGAAAAGAGAGCATAGACGTTTGACACGTACGAAATGCACGGCTAGGTTTCGTGTGACATACAAAGCCAATAAAGGTAGATTTGTAGTGTCTGTGTTTGAAGAGACTCATAACCATGAATTAACATCAGCTAGGTTTGTGCACTTACACCCGGTTTATCGTAAAATTAGCGAAGCAGATAGAGCTCAGGTTGATGGTATGCAGTCACGTGGAATTAGAACTTGTCATATTATGGGGTACATGGTTGCTCAGAAGGGTGGATATGGTGGTGTTGGGTTTACGAAGAAAGATCTTTATAATTATTTTGATAAAAAAATGCGTGATATTGTTAAAGATGGTGATGTTGCCGCATCGCTACATTATCTTAATGCAAAGTCAGCTACTGATCCCATGCTCTATGCTGAATATGCTGCTGACACTAGCAATGGACGGATGAAGTCTCTTTTTTGGGCTGATGGGACCAGTAGATCTGACTACTTCTGTTTTGGAGATGTGGTTGCATTTGACACAACATACAAGAGGAACAAATACAACCTCCCGCTGGTTATATTTTCAGGTTGTAACCACCATTCCCAAACAATAATTTTTGGCGCTGCGTTGGTATCAGATGAAACCACGGAGACGTATAAGTGGGTGTTGAATTGTTTTTTGGAGTGTATGGAAAATAAACGCCCAAAAGCTGTGGTGACAGATGGAGATGGGGCTATGAGGGAGGCTATAAAAGAGGTTTTCCCCGATGCGACCCATCGGTTATGTGCCTGGCATTTGAATAAGAATGCAGGTGAGAATGTGAAGAATTCAGGTTTTTTGAAGGGATTTAAAAAAGCCATGTTCTCAAATTTTTCAAAGGATGATTTTGAAGAGTATTGGTCAGAGATGATTAAAGAAAATGGAGTTGAAGGACATCCTTGGGTTATCAAAACCTACGAGAACAAGTTACTATGGGCAACTGCATACCTGCGGGATAAGTTTTTTGGACGTATAAGAACTACGTCTCAATGTGAAGCAATCAATGCAATAATAAAGAGTTATGTCAGAAAGAAAGGATGCATCTTTGAATTTATGCAAAATTTTGAGCAGGCTCTAAGAGGCTACAGAAACAATGAACTTGTTGAAGATTTTAAGTCAAAGTTTTCAGAACCTGTGTTGACAACTCAACTACGTTTGATTGAGAGCAATGCCGCTAAAATCTATACAGCGGAGATTTTCAAAGAAGTGAAAGAAGAAATTATGAAGGCCGGTGAATTGATTGTTAAGCATAAAAAGGAAATTGGAGATACTAAGTTTTATACTTTGACTAAATATTGTCGGGATGTGTATGAAAGAACAGTTGTTTACGATGGTGATACATTCCAATGTTCGTGCCGGTTGTTTGATTCTCGTGGACTTCCTTGTTCTCATATTTTTCACGTGATGAAGGAAGAACATGTTGATCACATTCCTAGCACTTTGGTATTGTCGCGATGGACCAAGGATGCTAAAATTGATTATTTGAACATGGTGGATGTTAATGATCCAGTTGATTCCGATGTGATTGAGCTTGCCCGTTTTGGTGCATATTGTTCTGTTCTGACATCATTTTGCAAAGAAGCTTCTAAAAAGAGTGGTGTGTATGGTGACATTATGGATGACCTCATGAATTTAAAAAAAAAATATTGCAGTGTTGAGGATCCTATTGGAACACAAAAGTCAGTTGTTGGTGATCCTATCCCGGTTCAGAGTAAAGGTGCTCCAAAGAAAAAAAAGAATGACGCAAAAGCTCTCAGGCATTGTACTCATTGCAAGAGTACAACTCATAATGCGAGGACTTGTTCGGACAAAAAGAGAAAAAAAAGTTGCAACGCTGAAAGTAGTGTGCAAGACATAAATTCAGAGCTACCGGTTGACGTTGGTGAAAGTAGTGTGCGACAGAAAAAGAAGAAATGTGCAGAGCAACCGAAAGACCTTTGCGAAAGTAGAGTGGCACCAAAAAAGAAGAAATGTTCAGAGCTACCGAAAGATCGTTGTGAAAGTATTGTGCAAAAGAAAAATAAATGTTCGGTGCAACTGAAAGAGCGTGGCGCTAATGTGTCAACACCAACACATATTGATGTTACTAGTGCGACCGGGCAATTCACTCCGATGTATGGATTTCAACATATGATTCCTATGTTACATCCGGTTATGACAGATGCACGTACCATCTGGACAACATGTTCCACCTGCACAACATGTAACTTCTGTACCACATGTACCACCTATATACCAAATGTATGGAATGAATGTTGGTGCAAATTCAACTTCGTGTTATGGTCTGTTACAACAGGTGATGAAATCTGCTGA 2802 0.3897 MVKIDESLDVDSNEVSSTDSHTSDDEDSSYSVSGGHDRSDDGDDTGDHHDDDDDGDDDDDDDDDDDDDDDDHDFGDEASIGERAVRINSMTADEIRGMEFGSVDEAYEFYYQYGKCKGFSVRKSDDKKKIGPDGSKIITNKLFVCSRQGLRDKRHISRLDRKREHRRLTRTKCTARFRVTYKANKGRFVVSVFEETHNHELTSARFVHLHPVYRKISEADRAQVDGMQSRGIRTCHIMGYMVAQKGGYGGVGFTKKDLYNYFDKKMRDIVKDGDVAASLHYLNAKSATDPMLYAEYAADTSNGRMKSLFWADGTSRSDYFCFGDVVAFDTTYKRNKYNLPLVIFSGCNHHSQTIIFGAALVSDETTETYKWVLNCFLECMENKRPKAVVTDGDGAMREAIKEVFPDATHRLCAWHLNKNAGENVKNSGFLKGFKKAMFSNFSKDDFEEYWSEMIKENGVEGHPWVIKTYENKLLWATAYLRDKFFGRIRTTSQCEAINAIIKSYVRKKGCIFEFMQNFEQALRGYRNNELVEDFKSKFSEPVLTTQLRLIESNAAKIYTAEIFKEVKEEIMKAGELIVKHKKEIGDTKFYTLTKYCRDVYERTVVYDGDTFQCSCRLFDSRGLPCSHIFHVMKEEHVDHIPSTLVLSRWTKDAKIDYLNMVDVNDPVDSDVIELARFGAYCSVLTSFCKEASKKSGVYGDIMDDLMNLKKKYCSVEDPIGTQKSVVGDPIPVQSKGAPKKKKNDAKALRHCTHCKSTTHNARTCSDKKRKKSCNAESSVQDINSELPVDVGESSVRQKKKKCAEQPKDLCESRVAPKKKKCSELPKDRCESIVQKKNKCSVQLKERGANVSTPTHIDVTSATGQFTPMYGFQHMIPMLHPVMTDARTIWTTCSTCTTCNFCTTCTTYIPNVWNECWCKFNFVLWSVTTGDEIC* 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3044 933 MobiDBLite consensus disorder prediction 18 45 - -
Tpr6g3044 933 MobiDBLite consensus disorder prediction 1 85 - -
Tpr6g3044 933 SMART 26again6 611 638 IPR006564 GO:0008270
Tpr6g3044 933 MobiDBLite consensus disorder prediction 46 75 - -
Tpr6g3044 933 PANTHER OS02G0262500 PROTEIN 94 762 - -
Tpr6g3044 933 ProSiteProfiles Zinc finger SWIM-type profile. 600 636 IPR007527 GO:0008270
Tpr6g3044 933 Pfam MULE transposase domain 325 419 IPR018289 -
Tpr6g3044 933 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 94 762 IPR031052 GO:0006355
Tpr6g3044 933 Pfam FAR1 DNA-binding domain 108 202 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3044 Tpr-Chr6 33081821 33085711 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Tpr6g3044 FAR1 2e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3044 - - ccaj:109792835 861.677