Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3040 ATGGCAAACTCGTTAATGAACAACAAATTGCACACTAAAATCACCCTACTATCTCTCATTTTACTATTGTACCCTCTAGTTACTAACTCATACAACCCTGATTACAATTTAGCCATTAATTGTGGCTCCTCAAAAAACGCTACTGCATCTGATAATCGCACTTGGGTTGGTGATAACTTCGATCCCATTACTTATATTGACCAAAAGCCCATATACAATCCCCTTAACATTACCAAAGTTCCATACACAACCGCACGTTTCTTTTTCTCAAATTTCACATACTCTATTCCTATCAACATTACTAATAATTCCACTGTTTTTCTTCGCCTTCATTTTTACCCAACTTCATACCAAAACTTTGATCCCTCCAATGCAATTTTCTCTGTCAAAGTAAACAACAACCTTACCCTTCTTAAAAACTTCAACGCTTCACTTTGGCTTCATCATGATGATAATGGGGAAACAATCATCAAAGAATATTGCATTCAAATCAAACCAAATGAGAATCTGCTAAACATAACTTTCATTCCCTACAGCATAGACGAATCCAATCGTTATTATGCTTTCATTAACGGAATTGAAATTGTGTCTATGCCTTCTTTTCTCTATTACTCAGACCTTGATGACTTGAATTATAATATAAGATCAGTTGACACAGGCACCACAGATTACAAAATTCAAAAAGATAAAGCTTTGGAGATGGTTTATAGAGTCAATGTTGGTGATATTCAAGTTCCACCAAGCAATGATACAGGTATGTTTCGTAATTGGGATAATGATTATCCTCTTTATTTGGAGAAACAATATCCATATAGTGTACAAAATGATTATGGAGATCAGCTAAACTATTTAGAAAATACCATTCCAAATTACACTGCACCAGAACTTGTATACTTAACTGCAAGAACTTATGGATTGGATGCGAAAGATAATTATAATGTAACTTGGAATTTTGAAGTTGATTCTTCTTTTACCTATATGGTAAGGTTATATTTTTGTGAGTTTGAGCAAGAAATAAAGCAAGTGGGTGATAGAGTCTTTCAGATTTTCATAGACAACACTTTGGCTGAGGAATACGCTGATGTGATTATGTGGAGTGGTGCTCGTTTGGTTCCTGTTCACAAGGATTATGTTGTGACTATGTACTCTCAGGAAGGTAGCTCTAAAATTGAAAGAGTCAATCTTTCAATCAAGCTACAACTATTACCAGCAAATATCAACAACAAAAGATATTTTCGTGATGTCCTATTGAATGGAATCGAGATTCTAAAAATAAGTGGCAAAAATAAAAATCTCGCAGGACCAAACCCAAAATCCATTGCTCTACCTCTCCCGCATCAAGTAGTTTCAACCCAATCCATAAAAAAAAATAAGATCACCATAGCTATCTTAGTTGTGATTCCATTTTTAGGCCTCGTGCTAGTAATTGTTGTCGGTAAAACAGTTTCTTGGCTGTGGAGAAGGTTTCACGGTGAAAGGGAAGATAACTCTAAGACGAAAAATGAAGGGTCGTTATCTTTGCCACCACATTTATGCCGCTACTTTACAATTACAGAGATCAGAGCAGCAACGAACAACTTCGATGATGTTTTCATCATTGGTGTTGGAGGGTTTGGCAACGTATACAAAGGTTGCATCGATGGATCCACACCCGTTGCGATAAAACGCCTCAAATCAGGCTCTCAACAAGGAGCCAACGAGTTCATGAACGAGATTGAGTTGCTCTCTCAACTTCGCCACGTTCACTTGGTATCCCTCGTCGGTTATTGCAACGACGACACAGAGATGATTCTTGTTTATGAGTTCATGCAACACGGTACTCTCTGTGAGTATCTCTATGGTTCCAATAACCATCCCTTACCATGGAAGCAAAGGCTTGAGATTCTATTGGGTGCAGCGAAAGGGCTACATTATCTTCATGCAGAAGTGAAACACAAAATAATACATCGTGACGTGAAGAGCACCAACATATTGTTGGATGAGAAATGGGTGGCTAAGGTTTCCGACTTCGGATTATCCAAAGTGGGACCCACGGGGATATCGACAACCCATGTCAGCACAATGGTGAAGGGGAGCCTTGGGTATTTAGATCCCGAGTACTATATGTTCCAAAGGCTTACATTGAAATCTGATGTGTACTCCTTCGGTGTTGTTCTTCTTGAGGTATTGTGTGCTAGGCCACCTTTGGTTCGCGATTTGGATAAGAAGACAGCTAGTCTAGTTTGTTGGTTTCAAAAATGCTATGACGAAGGTGTTGCGATTGAACAAATAGTTGATCCATTCCTTAGGGATTCTATCACAGGTGAGTGTTTGAAATGTTATTGCAAGTTGGCTTTGAGTTGTTTGCATGACGATGGGACTCAACGTCCCACAATGAGTCAAGTGGTTGGGGATTTAGAGTTTGCGTTGCAATTGGTGGTGAGCGAAGAAGGTAGCCAATTTGGTAAGGCCGAAAAAGAGGGAAGATATATGAAAGGACCACAATTCTCGCAGTTTATGAGTGATGAAGAAAGTGATTTGCATTTCGTAAGATCCCACACCTACAAGGAGAGTACACTCTCAGCATGGCCAAGTAGTCAAGAACATCCTTTCTCGGAGATTCCGAATCCAAGACCACGATCATATTCATGTCAAAACCTCAAAGTTTATATTTAG 2655 0.3876 MANSLMNNKLHTKITLLSLILLLYPLVTNSYNPDYNLAINCGSSKNATASDNRTWVGDNFDPITYIDQKPIYNPLNITKVPYTTARFFFSNFTYSIPINITNNSTVFLRLHFYPTSYQNFDPSNAIFSVKVNNNLTLLKNFNASLWLHHDDNGETIIKEYCIQIKPNENLLNITFIPYSIDESNRYYAFINGIEIVSMPSFLYYSDLDDLNYNIRSVDTGTTDYKIQKDKALEMVYRVNVGDIQVPPSNDTGMFRNWDNDYPLYLEKQYPYSVQNDYGDQLNYLENTIPNYTAPELVYLTARTYGLDAKDNYNVTWNFEVDSSFTYMVRLYFCEFEQEIKQVGDRVFQIFIDNTLAEEYADVIMWSGARLVPVHKDYVVTMYSQEGSSKIERVNLSIKLQLLPANINNKRYFRDVLLNGIEILKISGKNKNLAGPNPKSIALPLPHQVVSTQSIKKNKITIAILVVIPFLGLVLVIVVGKTVSWLWRRFHGEREDNSKTKNEGSLSLPPHLCRYFTITEIRAATNNFDDVFIIGVGGFGNVYKGCIDGSTPVAIKRLKSGSQQGANEFMNEIELLSQLRHVHLVSLVGYCNDDTEMILVYEFMQHGTLCEYLYGSNNHPLPWKQRLEILLGAAKGLHYLHAEVKHKIIHRDVKSTNILLDEKWVAKVSDFGLSKVGPTGISTTHVSTMVKGSLGYLDPEYYMFQRLTLKSDVYSFGVVLLEVLCARPPLVRDLDKKTASLVCWFQKCYDEGVAIEQIVDPFLRDSITGECLKCYCKLALSCLHDDGTQRPTMSQVVGDLEFALQLVVSEEGSQFGKAEKEGRYMKGPQFSQFMSDEESDLHFVRSHTYKESTLSAWPSSQEHPFSEIPNPRPRSYSCQNLKVYI* 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3040 884 SMART serkin_6 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3040 884 SUPERFAMILY Protein kinase-like (PK-like) 501 802 IPR011009 -
Tpr6g3040 884 ProSiteProfiles Protein kinase domain profile. 527 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3040 884 PANTHER OS07G0166700 PROTEIN 29 862 IPR045272 GO:0004714|GO:0006468
Tpr6g3040 884 CDD STKc_IRAK 533 800 - -
Tpr6g3040 884 Gene3D Phosphorylase Kinase; domain 1 489 602 - -
Tpr6g3040 884 Gene3D - 33 199 - -
Tpr6g3040 884 Gene3D - 230 425 - -
Tpr6g3040 884 ProSitePatterns Serine/Threonine protein kinases active-site signature. 647 659 IPR008271 GO:0004672|GO:0006468
Tpr6g3040 884 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 29 862 - -
Tpr6g3040 884 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Tpr6g3040 884 Pfam Malectin-like domain 39 424 IPR024788 -
Tpr6g3040 884 Gene3D Transferase(Phosphotransferase) domain 1 603 815 - -
Tpr6g3040 884 Pfam Protein tyrosine and serine/threonine kinase 533 799 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3040 Tpr-Chr6 33031220 33034537 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3040 31 810 Receptor kinase-like Gene Family AT3G51550 44.873 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3040 Malectin_like 1e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3040 - - mtr:MTR_7g015250 1155.2