Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3039 ATGGCAACCTCGATAAACAAAAACTTTCTCACTAAACTCACCATACTATCTTTCATTTGGTTACTTGTCCCTCTAGTTGCTAACTCATACAACCCTATTTACAATTTAGCCGTCACTTGTGGCTCCTCAACAAACACTACTGCCTTAGACAATCGAATTTGGATTGGTGATGATGATATTCATAACTCCAATCTCTTTACTTTCATTGAACCAAAAACCACAAACCCATCTCTTAAATTACCTCCAAATTCCCTTTCAAATATCCAAATTCCATTCACAATGGCACGTGTCTCTCTCTCAAATTTCACATACTCAATTTCTAGCATCACTACTTCCCCTGTTTTTCTTCGCCTTCATTTTCACCCAACAACTTATCAAGCCTTTGAACCCTCCAATGCAATTTTTTCTGTTGTAGTAAACAACAACCTTACCCTTCTTGAAAACTTCAACCCTTCACTTTGGATTCGCAATGATGAGGACAGAATCACGAAAGAATATTGCATCCAAATCAAACCAAATGAGAATTTGCTAAACATAACTTTCATTCCAAGCAACATAAACCAATCAAATGTTTATTATGCTTTCATTAACGGAATCGAAGTTGTGTCCATGCCACCTTTTCTCTATTACTCAGACCTTTCTGACTTGAATTATCAGATAAGATCAGTTGACACAGACACCACAGATTACAAAATTCAAAACGACAAAGCTTTGGAGATGGTTTATAGAGTGAATGTTGGTGATAATCAAGTTCCACCAAGTAATGATACAGGTATGTTTCGTGATTGGAAAAATGATTTTCCTCTTTACTTGGAGAAAGAATATCCACTAAGTGACCCAGTTGATTTTGGAGATCATCTCAACTTTGTAAACAATACCATTCCAAATTACACTGCACCAGAAGCTGTATACTTTACTGCAAGAAGTTATGGAATGAATGTGACAGAGGATTATAATGTAACTTGGAATTTTGAAGTTGATAATGCTTTTACTTACACTGTAAGGTTACATTTTTGTGAGTTTGATATGGCTATAAAAAATCAACGTGATAGAGTCTTTCGGATTTTCATAGCTAACACTTTGGCTGAGGAATTTGCTGATGTGATTAGGTGGAGTGGTGATAACAGGGTTCCTGTTCATAAGGATTATGCCGTGCCTATGTACTCTCAAGAAGGAATCTCTCAAATTGAAAGAGTTAATCTTTCAATCAAGCTTCAACGATTACCAGCTGAGTACACACTATACAGTGATGTCTTATTGAATGGAATAGAGATTTTCAAAATAAATGATAAAAATAATAATCTCTTTGGGTCGAATCCAAAACCGATTAATTTGTCTTCCAAAGAAATAGATTCACATTCACCCAATAAACAATTCAAGATGTCAACCATAATTATCCTTGTTGTGGTTGCGGTTACATGCCTCATGCTAGCATATGTTATCGGAATTAAAAAAATTGTTCAAAGGAGAAAAAGATCTAAATCTCTAGTTGAAATGGAAGATATATCATGGAAGAAAAAGAAAGAAGGTTCGTCGTCTTTACCATCCCATTTGTGTCGCTATTTTACAATAGCGGAGATAAAAGCTGCTACAAACAACTTTGATGATATTTTTATCATCGGGGTTGGAGGGTTCGGGAACGTGTACAAAGGTTACATTGATGGTGTTACACCTGTTGCGATAAAACGTCTTAAACCAGGTTCTCAACAAGGTGTAAATGAGTTCATGAATGAAATCGAGTTGCTCTCTCAACTTCGTCATATTCACTTAGTTTCCCTCATTGGATATTGCAACGAAGGTGCAGAGATGATTCTCGTTTACGATTTCATGCAACGTGGCACTCTCACTGAATATCTCTATGGTTCAGATAATGAACCTCTTACCTGGAAGCAGAGACTCGAGATTCTGTTGGGTGCAGCAAGGGGGTTGCATTATCTTCATGCAGGTGCGAAGCACAACATCATACATCGCGATGTGAAGAGTACCAACATATTGTTGGATGAAAAATGGGTGGCTAAGGTTTCTGATTTTGGGTTATCAAAAATGGGACCGTCTGGAATGTCGATGACCCATATCACTACAATTGTGAAGGGTAGTCTCGGGTATTTGGATCCAGAATACTACATGCGACAACGGTTGACTCTAAAGTCTGACGTGTACTCTTTCGGTGTGGTGCTTCTTGAAGTGTTGTGTGCAAGACCTCCTTTGATTCGTTCTTTGGATAAGAAAAAAGCGAGTTTGGCTGTTTGGTTCCAAAGATGTTACAATGAAGGTGTGGTAATTGAAGAGATGGTGGACCCGTTCATAAAAGATTCTATTACAGATGAATGTTTCAAGTGTTATTGTCAAATGGTGTTGAGTTGTTTGCACGAGGATGGAAATCAACGATTGTCGATGAGTGATGTGGTTGGAGCTTTAGAGTTTGCATTGCAGCTGAATATGAGTGAGGAGGATAGTAAGTTTGGTGAAATCAAGGAAAAAAGTGAGCAGAGGGTAAAGTTGTCGGAATTTACGATTGATGACGCGAGTGACTCGCAATTCACAAGTAGTGGTGATGATTATGATGAGTCCCATACCAGCAAGGTAAGTTCCATTTCAGCCACTACTGAAGACCAACCGCTGTTTTCTGCTACGATTTTTTCCGAGAATGGTAATCCAAGAGCTCGATAG 2670 0.3801 MATSINKNFLTKLTILSFIWLLVPLVANSYNPIYNLAVTCGSSTNTTALDNRIWIGDDDIHNSNLFTFIEPKTTNPSLKLPPNSLSNIQIPFTMARVSLSNFTYSISSITTSPVFLRLHFHPTTYQAFEPSNAIFSVVVNNNLTLLENFNPSLWIRNDEDRITKEYCIQIKPNENLLNITFIPSNINQSNVYYAFINGIEVVSMPPFLYYSDLSDLNYQIRSVDTDTTDYKIQNDKALEMVYRVNVGDNQVPPSNDTGMFRDWKNDFPLYLEKEYPLSDPVDFGDHLNFVNNTIPNYTAPEAVYFTARSYGMNVTEDYNVTWNFEVDNAFTYTVRLHFCEFDMAIKNQRDRVFRIFIANTLAEEFADVIRWSGDNRVPVHKDYAVPMYSQEGISQIERVNLSIKLQRLPAEYTLYSDVLLNGIEIFKINDKNNNLFGSNPKPINLSSKEIDSHSPNKQFKMSTIIILVVVAVTCLMLAYVIGIKKIVQRRKRSKSLVEMEDISWKKKKEGSSSLPSHLCRYFTIAEIKAATNNFDDIFIIGVGGFGNVYKGYIDGVTPVAIKRLKPGSQQGVNEFMNEIELLSQLRHIHLVSLIGYCNEGAEMILVYDFMQRGTLTEYLYGSDNEPLTWKQRLEILLGAARGLHYLHAGAKHNIIHRDVKSTNILLDEKWVAKVSDFGLSKMGPSGMSMTHITTIVKGSLGYLDPEYYMRQRLTLKSDVYSFGVVLLEVLCARPPLIRSLDKKKASLAVWFQRCYNEGVVIEEMVDPFIKDSITDECFKCYCQMVLSCLHEDGNQRLSMSDVVGALEFALQLNMSEEDSKFGEIKEKSEQRVKLSEFTIDDASDSQFTSSGDDYDESHTSKVSSISATTEDQPLFSATIFSENGNPRAR* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3039 889 CDD STKc_IRAK 540 807 - -
Tpr6g3039 889 PANTHER OS07G0166700 PROTEIN 28 844 IPR045272 GO:0004714|GO:0006468
Tpr6g3039 889 Gene3D - 236 429 - -
Tpr6g3039 889 Gene3D - 34 204 - -
Tpr6g3039 889 MobiDBLite consensus disorder prediction 843 867 - -
Tpr6g3039 889 Pfam Malectin-like domain 39 428 IPR024788 -
Tpr6g3039 889 SMART serkin_6 534 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3039 889 ProSiteProfiles Protein kinase domain profile. 534 809 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3039 889 ProSitePatterns Protein kinases ATP-binding region signature. 540 562 IPR017441 GO:0005524
Tpr6g3039 889 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Tpr6g3039 889 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 28 844 - -
Tpr6g3039 889 SUPERFAMILY Protein kinase-like (PK-like) 510 808 IPR011009 -
Tpr6g3039 889 Gene3D Transferase(Phosphotransferase) domain 1 610 833 - -
Tpr6g3039 889 Gene3D Phosphorylase Kinase; domain 1 495 609 - -
Tpr6g3039 889 Pfam Protein tyrosine and serine/threonine kinase 540 805 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3039 Tpr-Chr6 33025283 33028270 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3039 25 889 Receptor kinase-like Gene Family AT3G51550 43.392 0.0 643
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3039 Malectin_like 7e-32 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3039 - - mtr:MTR_7g015420 1184.86