Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3038 ATGGCAAATCCAGTAAATAAAAGATTTTACACCAAAATCAATCTACTTTCTCTGTTTTTTCTATCGTACCCTCTAGTTGCTAACTCATACAACCCAGATTACAATATAGCTATCAGTTGTGGCTCCTTAAAAAACACTTCTGGCTTAGACCATCGAATTTGGGTTGGTGATAGCATTGATAACTCTAAGATCTTTTCTTTCATTGAACCAAAAACCAAAAACCTATCTTTTAATACAAAGCCTATTTCCACCTATACCAACATTCTTTACACAACCGCACGCGTCTCTCACTCAAATTTCACATACTCAATTTCTACTATCACTACTTCCCCTGTTTTTATTCGCCTTCATTTTTACCCGTCTTCATACCAGAACTTTGATCCCTCCAATGCACTTTTCTCAGTTCAGGTAAACAACAATCTTACCCTTCTTAAAAACTTCAACCCATTACTTTGGCTTGATCATGTTGATGATGTGACTCCAATCATCAAAGAATATTGCATCCAAATCAAACCAAATGAGAAGCTAAACATAACTTTTATTCCCAACAACATAAATCATTCTAATCCTTGTTATGCTTTCGTTAACGGAATTGAAGTTGTGTCTATGCCTCAATTTCTCTATTACAGTGCCCCAGATTATCATTTCAATTACCTTACCCTTAACAGCAACGAATACCAAATTCATAGTGATAGTGCACTTGAGATGGTTTATAGAGTCAACGTTGGTCAAAATCAAGTTCCAACAAACCAAGATACAGGTATGTTTCGTAATTGGGAAGCTGATTATCCTCTTTACTTGGAGAAACAATATCCACAAAGTTTGTCAAGTGATTTTGGAGAACGTGTAAACTATTCACTAAATACCAATCCAAATTACACTGCACCAGAAGATGTTTACAGAACTTCAAGAAGTTATGGAATGGATAGCACAGAGGATTACAATGTAACTTGGAATTTTGAAGTTGATTCTACTTTTACTTATATGGTAAGGTTACATTTTTGTGAGTATGATTACCATATCAGGATTGCAGGTGATAGAGTTTTTCAGATTTTTATAAATGACACTTTGGCCGAAGAAACTGCAGATGTGATTCTTTGGGCTGGTGGTCGATTGATTCCTGTTCATAAGGATTATGCTGTATCCATGTACTCTCAAGAAGGTAACTCTAAAATTGAAAGAGTTAATCTTTCGATCAAGCTACAACGATTACCAAAATCTATGTCGTATGTGTTTACAAATTATCATGAAGTCATCTTGAACGGAATCGAGATTTTCAAAATAAGCGACACAAACTACAGTCTTGCAGGGTCGAATCGCAAATCCATTATTTTAAATCCCAAGCAACAATTTTTACCAAGTGAAAAATCGAAGAAGTCAATCTTAGTTGTTGTTGTTGTTGTAGTTTCATGTTTCTTGTTAGCATCTGTTATTGGAATGATAGTTTTTGTTCGAAGGAGAAGAAGATTTGAATCTCATCCTGAAATGGAAGAAAGTACACGGAGGATAAAAAAAGAAGGTTCATCAACTTTACCATCCCATTTGTGTCGCTATTTTACAATAGCGGAGATAAAAGCTGCTACAAACAACTTTGATGAAATTTTTATCATCGGGGTTGGAGGGTTTGGCAACGTGTACAAAGGTTACATCGATGGAGTTACACCTGTTGCGATAAAACGTCTTAAACCGGGTTCTCAACAAGGTGTGAACGAGTTCATGAATGAGATCGAGTTGCTCTCTCAGCTTCGTCATATTCATTTGGTTTCCCTCATAGGATATTGCAACGATGGTGTGGAGATGATTCTCGTTTACGACTTCATGCAACGTGGCACTCTTCGTGAATATTTATATGGTTCCGATAACGAACGCCTTACTTGGAAGCAGAGACTCGAGATTCTATTGGGTGCGGCAAGAGGGTTGCATTATCTTCATACTGGTGCGAAGCACAGTATCATACATCGTGATGTGAAGAGTACTAACATACTCTTGGATGAGAAATGGGTGGCTAAGGTTTCTGATTTCGGGTTATCAAAAGCGGGACCAACGGGAATGGCTATGACCCATGTCAGCACTGTGGTGAAGGGTAGTATAGGGTATTTGGATCCAGAATACTACCTCCGTCAAAGGTTGACTCTAAAGTCTGACGTGTACTCTTTCGGTGTTGTGCTTCTTGAAGTGTTGTGTGCAAGACCTCCTTTGGTTCGTTCTTCGGAAAAGAAAAAAGCAAGTTTGGTTATTTGGTTCCAAAGATGTTACAAGCAAGGTCTGATAGTCGAAGAATTGGTTGACCCGTTCATAAAGGATTCTATAACAAGTGAGAGTTTGAAATGCTATTGTCAAATGGTGTTGAGTTGTTTGCATGATGATGGAAATCAACGAATGTCGATGAGTGATGTGGTCGGGGCTTTAGAATTTGCATTGCAGTTGGTAACGACGGAGGAGGATAGTAAATTTGGATGGACCAAAGAAAAAGAAAAAAGTGAGCAAAGACTGTTACCGCATTTTACGAGTGAGGACGGTAGCGACGTGTTCACGAGTAGTAGTGATGACTATGGATCTCAAACAAGTAAGGTAAGCACCATTTCAACCAGTACTGAAGGACAACCTATGTTATCTGCGACTGTGTTTTCTGAGATTGGGAATCCAAAAGCACGATAG 2658 0.3815 MANPVNKRFYTKINLLSLFFLSYPLVANSYNPDYNIAISCGSLKNTSGLDHRIWVGDSIDNSKIFSFIEPKTKNLSFNTKPISTYTNILYTTARVSHSNFTYSISTITTSPVFIRLHFYPSSYQNFDPSNALFSVQVNNNLTLLKNFNPLLWLDHVDDVTPIIKEYCIQIKPNEKLNITFIPNNINHSNPCYAFVNGIEVVSMPQFLYYSAPDYHFNYLTLNSNEYQIHSDSALEMVYRVNVGQNQVPTNQDTGMFRNWEADYPLYLEKQYPQSLSSDFGERVNYSLNTNPNYTAPEDVYRTSRSYGMDSTEDYNVTWNFEVDSTFTYMVRLHFCEYDYHIRIAGDRVFQIFINDTLAEETADVILWAGGRLIPVHKDYAVSMYSQEGNSKIERVNLSIKLQRLPKSMSYVFTNYHEVILNGIEIFKISDTNYSLAGSNRKSIILNPKQQFLPSEKSKKSILVVVVVVVSCFLLASVIGMIVFVRRRRRFESHPEMEESTRRIKKEGSSTLPSHLCRYFTIAEIKAATNNFDEIFIIGVGGFGNVYKGYIDGVTPVAIKRLKPGSQQGVNEFMNEIELLSQLRHIHLVSLIGYCNDGVEMILVYDFMQRGTLREYLYGSDNERLTWKQRLEILLGAARGLHYLHTGAKHSIIHRDVKSTNILLDEKWVAKVSDFGLSKAGPTGMAMTHVSTVVKGSIGYLDPEYYLRQRLTLKSDVYSFGVVLLEVLCARPPLVRSSEKKKASLVIWFQRCYKQGLIVEELVDPFIKDSITSESLKCYCQMVLSCLHDDGNQRMSMSDVVGALEFALQLVTTEEDSKFGWTKEKEKSEQRLLPHFTSEDGSDVFTSSSDDYGSQTSKVSTISTSTEGQPMLSATVFSEIGNPKAR* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3038 885 CDD STKc_IRAK 537 804 - -
Tpr6g3038 885 Gene3D Phosphorylase Kinase; domain 1 492 606 - -
Tpr6g3038 885 ProSitePatterns Protein kinases ATP-binding region signature. 537 559 IPR017441 GO:0005524
Tpr6g3038 885 Gene3D Transferase(Phosphotransferase) domain 1 607 827 - -
Tpr6g3038 885 SMART serkin_6 531 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3038 885 Gene3D - 32 204 - -
Tpr6g3038 885 Gene3D - 232 429 - -
Tpr6g3038 885 SUPERFAMILY Protein kinase-like (PK-like) 506 805 IPR011009 -
Tpr6g3038 885 Pfam Malectin-like domain 38 428 IPR024788 -
Tpr6g3038 885 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 28 829 - -
Tpr6g3038 885 MobiDBLite consensus disorder prediction 837 885 - -
Tpr6g3038 885 PANTHER OS07G0166700 PROTEIN 28 829 IPR045272 GO:0004714|GO:0006468
Tpr6g3038 885 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Tpr6g3038 885 Pfam Protein tyrosine and serine/threonine kinase 537 800 IPR001245 GO:0004672|GO:0006468
Tpr6g3038 885 MobiDBLite consensus disorder prediction 839 875 - -
Tpr6g3038 885 ProSiteProfiles Protein kinase domain profile. 531 806 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3038 Tpr-Chr6 32989719 32992776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3038 25 885 Receptor kinase-like Gene Family AT3G51550 43.819 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3038 Malectin_like 1.3e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3038 - - mtr:MTR_7g015420 1155.97