Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3034 ATGGAAGCTCACAAATTAAAAGAGTTAATCTTTCGATCAAGCTACAACGATTACCAAACACGTACGCACAATATCGTGAATCGTGATGTCATATTGAATGGAATAGAGATTTTCAAAATAAGTAATAATAACAATCTCGCAGGTTTGAATCCAATGAAACACGTTGTTCTATCATCTCCAAAGCAATTACCAACTCAACAATCAAAGTCAAAGAAGTCAACCATAGTCATGGTTTCAGTGGTTGGATTATCATGTCTCTTGCTAGCATTTGTGATGGGAATAATAATTTATGTTAAAAGGAGAAGAAGATTTGAGTCTCATCTTCAAATGGAAGAAAATTCATGGAAAACAAAGAAAAAAGGTTCATCAACTTTACCATCCCATCTATGTCGCTATTTTACAATAGAGGAGATAAGAGCCACAACAAACAACTTTGAAGATATTTTTATCATCGGGGTAGGAGGGTTCGGCAATGTGTACAAAGGTTACATCGATGAAGTTACACCAGTTGCAATAAAGCGTCTTAAATCAGGTTCTCGACAAGGTGTAAAAGAGTTCTTGAATGAGATCGAGTTGCTCTCTCAGCTTCGTCATATTCACTTGGTTTCCCTCATTGGATATTGCAACGAAGACACTGAGATGATTCTCGTTTATGACTTCATGCAACGAGGCACTCTCCGTGAAAATCTCTATGGTTCCGATATTGAACCTCTTAGGTGGAATAAGAGACTCGAGATTCTATTGGGTGCAGCAAGGGGGTTGCATTATCTTCATGCAGGTGCGAAGCACAATATCATACATCGTGATGTGAAGAGTACAAATATATTGTTGGATGAAAAATGTGTGGCTAAGGTTTCTGATTTTGGCTTATCAAAAGTGGGACCCACGGGAATATCGAATAGTCATATCAGCACTATGGTGAAGGGTAGTATAGGTTATTTGGATCCAGAATGCTACTTGCGGCATAGGCTGACTCTAAAGTCTGATGTGTACTCTTTCGGTGTGGTGCTTCTTGAGGTATTATGTGCAAGACCACCTTTGGATCATTCTTTGGATACACAAAATGTAAGTTTGGTTGTGATGTTCAAAAGATGTTACAATGAAGGTGTAATAATTGAAGAGTTGGTCGACCCATTCATAAAAGATTCTATAACAAGTGAGTGTTTGAAATGTTATTGCCAAATGGTATTGAGTTGTTTGCATGAAGATGGAAATCAACGAATGTCAATGAGTGATGTGGTTGGGACTTTAGAGTTTTTGTTGCAATTGGTGATGAATGAGGAGGATAATAATAATTTTGAAGAGAGTGATGTGTGTTTCACAAGTAGTAGTGATGACTATGGTTCTCATACAAGCAAGTTAAGCACCATTTCAACTAGTACTAGCTAA 1389 0.3751 MEAHKLKELIFRSSYNDYQTRTHNIVNRDVILNGIEIFKISNNNNLAGLNPMKHVVLSSPKQLPTQQSKSKKSTIVMVSVVGLSCLLLAFVMGIIIYVKRRRRFESHLQMEENSWKTKKKGSSTLPSHLCRYFTIEEIRATTNNFEDIFIIGVGGFGNVYKGYIDEVTPVAIKRLKSGSRQGVKEFLNEIELLSQLRHIHLVSLIGYCNEDTEMILVYDFMQRGTLRENLYGSDIEPLRWNKRLEILLGAARGLHYLHAGAKHNIIHRDVKSTNILLDEKCVAKVSDFGLSKVGPTGISNSHISTMVKGSIGYLDPECYLRHRLTLKSDVYSFGVVLLEVLCARPPLDHSLDTQNVSLVVMFKRCYNEGVIIEELVDPFIKDSITSECLKCYCQMVLSCLHEDGNQRMSMSDVVGTLEFLLQLVMNEEDNNNFEESDVCFTSSSDDYGSHTSKLSTISTSTS* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3034 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Tpr6g3034 462 Gene3D Phosphorylase Kinase; domain 1 104 220 - -
Tpr6g3034 462 ProSitePatterns Protein kinases ATP-binding region signature. 151 173 IPR017441 GO:0005524
Tpr6g3034 462 Pfam Protein tyrosine and serine/threonine kinase 151 416 IPR001245 GO:0004672|GO:0006468
Tpr6g3034 462 CDD STKc_IRAK 151 418 - -
Tpr6g3034 462 SMART serkin_6 145 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3034 462 PANTHER OS07G0166700 PROTEIN 23 456 IPR045272 GO:0004714|GO:0006468
Tpr6g3034 462 SUPERFAMILY Protein kinase-like (PK-like) 121 420 IPR011009 -
Tpr6g3034 462 ProSiteProfiles Protein kinase domain profile. 145 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3034 462 Gene3D Transferase(Phosphotransferase) domain 1 221 445 - -
Tpr6g3034 462 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 23 456 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3034 Tpr-Chr6 32948716 32950473 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3034 24 430 Receptor kinase-like Gene Family AT3G51550 49.770 1.63e-134 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3034 PK_Tyr_Ser-Thr 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3034 - - mtr:MTR_7g015420 639.802