Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3032 ATGCCAAACTGCGTGGAAGGAGGTGTAGAAAATTCAAGTCAACGTAGAAATTTGCAGGTTGGAAGAAGCATACTGAAATTTAATAAATTAATTCTTTCAAGTCTCAAGCCAATCACACTATTTTCTATAAACAATAAGCTTTCAAGTTACGTTCGTTCAACGAAACATAATGGTGAATCTGATTATCCAATAGCGGTGAAGGTTATGAAACGCAGAGACAGGAGGGATTTAATGAAGAATATTATTGAACTCCATTGCCAACTTCATCATCCGAATTTGATATCTTTAATTGGATTTTGTGAAAACAAATATGTATCATGTCTTGTGTATGAGTACATGTGCAATGGCTCTCTCCATGATCGCTTACTTTCAAGGGATATGGAATCACTGTCATGGAAGAAAAGGCTTGAAATAAGCATTGAAGTTGCAAAAGGACTACACTACCTTCACACTGGAGCAAAGCGCCCGATTTTCAACCGTGACATCACAACTCACAACATTCTTTTAGATAGCAAAATGGTACCAAAACTCAAACTTGAAATTTCCTTACAAGGGAAGTTTTCTAAATTGAACCAAAAACCAATTCAAGTCGACGCAATTTTCGGTACAATCAATTACATGGCGCCTGAGTATGCCCTATATGGAACTGTCACAGATAAATCTGACGTTTACTCTTTTGGTATGGTTCTACTTGATGTAGCATGCACAAACTACAATCTTACGATCAGGGATAAGATTGAAATGTTCCGGTTGGAGGAGGAAATTGCATTTTTAGAAGACCATAATGAGGTTTTACTTTTATATGAAGATATACTTAAAGGAGATAACTTCTGGGACAAGTTCCTAGATGCTGAGATTATTGATCCCATTCTTATGAGATTGATTGCTCTGCCGTGTTTGGAAGTGTACATGGATATTGCGAAAAGATGCTTGAAATCTGATCCAAATGAAAGACCAGCAATGGGTGAAGTTGAGGTTGAACTTGAGCATGCTCTAGCACTGCAGGAGGAGGAAGAAAAGTGTTGGAAAGAGTAA 1035 0.3739 MPNCVEGGVENSSQRRNLQVGRSILKFNKLILSSLKPITLFSINNKLSSYVRSTKHNGESDYPIAVKVMKRRDRRDLMKNIIELHCQLHHPNLISLIGFCENKYVSCLVYEYMCNGSLHDRLLSRDMESLSWKKRLEISIEVAKGLHYLHTGAKRPIFNRDITTHNILLDSKMVPKLKLEISLQGKFSKLNQKPIQVDAIFGTINYMAPEYALYGTVTDKSDVYSFGMVLLDVACTNYNLTIRDKIEMFRLEEEIAFLEDHNEVLLLYEDILKGDNFWDKFLDAEIIDPILMRLIALPCLEVYMDIAKRCLKSDPNERPAMGEVEVELEHALALQEEEEKCWKE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3032 344 Gene3D Phosphorylase Kinase; domain 1 50 113 - -
Tpr6g3032 344 Gene3D Transferase(Phosphotransferase) domain 1 114 343 - -
Tpr6g3032 344 PANTHER OS07G0166700 PROTEIN 49 339 IPR045272 GO:0004714|GO:0006468
Tpr6g3032 344 PANTHER TYROSINE KINASE FAMILY PROTEIN 49 339 - -
Tpr6g3032 344 Pfam Protein tyrosine and serine/threonine kinase 56 235 IPR001245 GO:0004672|GO:0006468
Tpr6g3032 344 PIRSF ILK 43 262 - -
Tpr6g3032 344 PIRSF ILK 301 344 - -
Tpr6g3032 344 SUPERFAMILY Protein kinase-like (PK-like) 50 327 IPR011009 -
Tpr6g3032 344 ProSiteProfiles Protein kinase domain profile. 41 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3032 Tpr-Chr6 32933145 32935717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3032 82 343 Receptor kinase-like Gene Family AT3G51550 37.023 9.17e-44 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3032 PK_Tyr_Ser-Thr 6e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3032 - - mtr:MTR_7g015750 289.271