Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3031 ATGAATGTAAAATATTCAAAGCATAAAAGTTCATACAAGAAACAATTTCCAACATTTATAAGGGAGCTATGCCATCAATTTTCTCTGAACGATCTTAAGAAATCAACCAATAACTTTGATAAAGATCGACAAATTGGAGAATCACAATACTATATAGTGTACGAAGGTTATCTCAAACATAATGGGGAAAATGATTATCCAATAGCAGTGATGCGGATGAGAAATATAGTCGACGAATGGTTTCAGAAGGAAATTGAACTCAACTGCCAGCTTTGTCACCCGAATTTGGCATCTTTTATAGGGTTTTGTGACCAAAAAGATGAGAAAATTCTTGTGTATAAAAAAGACGACATTGTAAATGGCTCTCTCACTGATCACGTACTGTCAAGGGATATCGAATCACTGACATGGAAGAAAAGGCTTGAAATAGGCATTGGAGCTGCAAAAGGACTACACTACCTTCACACCGGAGCAAAGCGCGCGATTTTTCACCGTGACGTAAAGCCAGCCAACATTCTTTTAGATAAAAGTATGGTACCAAAACTCTGGCAACTTGGATTTTCCTTACAAGGGAAGATTTCGAACTCGAAGTCAATACCAATTGAAGTCGATTTCATTTATGGTACATATGGTTTTATGGCGCCAGAGTATTACGAAACCAATACTTTCACAGATAAATGTGACGTTTACTCTTTTGGTATGGTTCTACTTAGTCTAGCATGCACAAACTACAATCTTACGATCAGGGATAAGATTGAAATGTTCCGCTTGGAGGAGGAAATTGCGTTTTTAGAAGACCATAATGAGGTTTTAGATGAGAATGTACTTACGGGAGATAACTTTTGGGACAAGTTCCTGGATGCTGAGATTATTGATCCCATTCACATGAGATTGATTGCTCTGCCGTGCTTGGAAGTGTACATGGATATCACGAAAAGATGCTTGAAATCTGATCCAAATGAAAGACCAGCAATGGGTGAAGTTGAGGTTGAACTTGAGCATGCTCTGGCTCTGCAGGAGGAGGAAGAAAAGTTTTGGAAATTGTAA 1047 0.382 MNVKYSKHKSSYKKQFPTFIRELCHQFSLNDLKKSTNNFDKDRQIGESQYYIVYEGYLKHNGENDYPIAVMRMRNIVDEWFQKEIELNCQLCHPNLASFIGFCDQKDEKILVYKKDDIVNGSLTDHVLSRDIESLTWKKRLEIGIGAAKGLHYLHTGAKRAIFHRDVKPANILLDKSMVPKLWQLGFSLQGKISNSKSIPIEVDFIYGTYGFMAPEYYETNTFTDKCDVYSFGMVLLSLACTNYNLTIRDKIEMFRLEEEIAFLEDHNEVLDENVLTGDNFWDKFLDAEIIDPIHMRLIALPCLEVYMDITKRCLKSDPNERPAMGEVEVELEHALALQEEEEKFWKL* 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3031 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Tpr6g3031 348 SUPERFAMILY Protein kinase-like (PK-like) 12 331 IPR011009 -
Tpr6g3031 348 Gene3D Transferase(Phosphotransferase) domain 1 118 346 - -
Tpr6g3031 348 SMART serkin_6 39 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3031 348 PANTHER OS07G0166700 PROTEIN 12 343 IPR045272 GO:0004714|GO:0006468
Tpr6g3031 348 Gene3D Phosphorylase Kinase; domain 1 1 114 - -
Tpr6g3031 348 ProSiteProfiles Protein kinase domain profile. 39 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3031 348 PANTHER TYROSINE KINASE FAMILY PROTEIN 12 343 - -
Tpr6g3031 348 Pfam Protein kinase domain 40 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3031 348 Coils Coil 254 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3031 Tpr-Chr6 32928208 32932583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3031 10 347 Receptor kinase-like Gene Family AT3G51550 35.191 5.52e-55 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3031 Pkinase 7.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3031 - - mtr:MTR_7g015750 382.489