Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3029 ATGTCCAACCCCCTCTTCCCCAGAAGGAAATCATGTTTCATGATGCAATGCAGGCTTGGTTCTTATGTAAATCTGAATCTAAACCTTGATATCAAACAAAATTCTCATGTGGGAAATATGCTTGCAAAATATTCGAAGCATAAAAGTTCATCTAAGAAACAATATCCAACAGTTATAGAAGAGCTATGCCATCAATTTTCTCTGGAAGATCTGAAGAATTCGACCAATAACTTTGATGAAGATCGAATAATTGGACAAACAAGTTTCAGCATAGCGTACAAAGGTTATCTCAAACATAATGGTGAAACTGATTACCCAATTGCATTGAAACGGATGAGAAATATATTTGACGAATGGAAATTCAAGAAGGAAATTGAACTTCACTGCCAGCTTCATCACCCGAATTTGACATCTTTAATAGGATTCTGTGACCAAAAAGATGAGAAAATTATCGTGTATGAATACATGTTAAATGGCTCTCTCTATGATCATTTGCGTTTAAGGGATATGGATCCACTCTCATGGAAGAAAAGGCTTGAAATATGCATTGGAGCTGCAAAAGGACTACACTACCTTCACACCGGAGCAAAGCGCACAATTTTTCACTGTGACATAAAGCCTCAAACCATTCTTTTAGATAATAGTATGGTACCAAAACTCTCACATCTTGGATTTTCCTTACAAGGGAAGCTTTCTAAATTGAACCCAAAACCAATTAAAGTCGACACCCTCATTGGTACATTTGGTTACATGGCACCAGAGTGTGTCTTAACCAACACTTTCACAGATAAATGTGACGTTTATTCCTTTGGTATAGTTTTATTTGAAGTAGCCTGCACAAGCTACAAGAATACCATCTTTGATAAGATGGTCATGTTAGAGGACATATATTGGTTTACAAATCAGTCATTTAATCCAACCATCTTTTTGGAGAGGTTCCCAGCTGATGAGATTATTGATCCGATTCTAATGAGATTGATTGCACCAAAATGTTTGGTAGTGTTCATGGATATCATGAAAAGATGCTTGAACATAGAACCAAATGAAAGACCAACAATGGGCGAGGTTGAGGTTGAACTTGAGCATGCTTTGGCACTGCAGCAGGAAGCAGATGATGGGAAAAGTAATGGTGATTTTAAGTTTTTTCCAACCACCATTTCTACCTAA 1167 0.3702 MSNPLFPRRKSCFMMQCRLGSYVNLNLNLDIKQNSHVGNMLAKYSKHKSSSKKQYPTVIEELCHQFSLEDLKNSTNNFDEDRIIGQTSFSIAYKGYLKHNGETDYPIALKRMRNIFDEWKFKKEIELHCQLHHPNLTSLIGFCDQKDEKIIVYEYMLNGSLYDHLRLRDMDPLSWKKRLEICIGAAKGLHYLHTGAKRTIFHCDIKPQTILLDNSMVPKLSHLGFSLQGKLSKLNPKPIKVDTLIGTFGYMAPECVLTNTFTDKCDVYSFGIVLFEVACTSYKNTIFDKMVMLEDIYWFTNQSFNPTIFLERFPADEIIDPILMRLIAPKCLVVFMDIMKRCLNIEPNERPTMGEVEVELEHALALQQEADDGKSNGDFKFFPTTIST* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3029 388 SUPERFAMILY Protein kinase-like (PK-like) 51 359 IPR011009 -
Tpr6g3029 388 Gene3D Transferase(Phosphotransferase) domain 1 156 381 - -
Tpr6g3029 388 PANTHER OS07G0166700 PROTEIN 48 383 IPR045272 GO:0004714|GO:0006468
Tpr6g3029 388 ProSiteProfiles Protein kinase domain profile. 78 365 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3029 388 Pfam Protein tyrosine and serine/threonine kinase 81 358 IPR001245 GO:0004672|GO:0006468
Tpr6g3029 388 PANTHER TYROSINE KINASE FAMILY PROTEIN 48 383 - -
Tpr6g3029 388 Gene3D Phosphorylase Kinase; domain 1 37 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3029 Tpr-Chr6 32914540 32919723 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3029 38 372 Receptor kinase-like Gene Family AT3G51550 38.304 4.20e-65 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3029 PK_Tyr_Ser-Thr 8.5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3029 - - mtr:MTR_7g015750 512.301