Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3028 ATGTTTCTCAAATATTTGAGTTTCTACCATTGGATATGGAAGCATAGGAAGCACAATCCAACACCAATGGTAATAGAAGAGTTATGCCATCAATTTTCTCTAGCTAGTATTAAGAAATCGACCAACAACTTTGATAAAAATCAAAAAGTCGGAAGTGGGAGCTTAGGCATAGTGTACAAAGGTTGTCTTCAATTACATAATGATACTATTGATTCTATGGTTATAATCAAACGAGTTCATCCTATTACAGACAAAAAATTAAGAGAATTTAGGAATGAAATTGAGTTGCTATGCCAACTTGATCATCCTAATTTGGTCAATTTATTAGGATATTGTGACCACAAAGATGAGAAGATTATTGTGTATGGTTACAATTCCAATGGATCTCTCTATAATCTCCTTTGTTGTAAACATAGTAGCATGAAACCTCTTACATGGAAACAAAGGCTAAAAATATGCATAGGAGTAGCATGTGGACTACACTATCTTCACACAGGAACCAAACGCACCATCTTTCATTGCGACATTCAATCTCATAAGATTTTATTGGATAGCAATATGGTGCCTAAACTCTCAGATTTTTGGATTTCCTTGCAAGGTCCTTTGTTTACTTCAATGCCAAAACCAAAGTCCATATTGAATGATAACATTGTTGGTTCATATGGTTATGTGGCTCCAGAGATTTTAGAAAACAATAAAGCAACATATAAGTGTGACGCTTACTCCTTTGGTATACTTCTACTAGAAGTGCTATGTTGGGAAAAGTTAGAAAATGTTAAGAGACAGAGACTCCCAATGGAAGAGAATATTGATGAGAATATCAAAGGAAACATTGCACCAGAATGTTGGGAAATATTTGTGGATTTCACAAAAAGATGTTTAAAGTATGATCCAAATGAACGACCAACAATGGGTGAAGTTGAGGTGCAACTTGAACTTGCTCTATCACTTCAGGAAAAAGCAGATAATAACAAAAACATCAATGTTGATAATGATCATTATACACTATCATCTACAACCATTATTGATGAATGA 1035 0.3401 MFLKYLSFYHWIWKHRKHNPTPMVIEELCHQFSLASIKKSTNNFDKNQKVGSGSLGIVYKGCLQLHNDTIDSMVIIKRVHPITDKKLREFRNEIELLCQLDHPNLVNLLGYCDHKDEKIIVYGYNSNGSLYNLLCCKHSSMKPLTWKQRLKICIGVACGLHYLHTGTKRTIFHCDIQSHKILLDSNMVPKLSDFWISLQGPLFTSMPKPKSILNDNIVGSYGYVAPEILENNKATYKCDAYSFGILLLEVLCWEKLENVKRQRLPMEENIDENIKGNIAPECWEIFVDFTKRCLKYDPNERPTMGEVEVQLELALSLQEKADNNKNINVDNDHYTLSSTTIIDE* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3028 344 ProSiteProfiles Protein kinase domain profile. 44 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3028 344 SUPERFAMILY Protein kinase-like (PK-like) 19 315 IPR011009 -
Tpr6g3028 344 PANTHER OS07G0166700 PROTEIN 19 326 IPR045272 GO:0004714|GO:0006468
Tpr6g3028 344 Gene3D Phosphorylase Kinase; domain 1 9 124 - -
Tpr6g3028 344 PIRSF ILK 12 327 - -
Tpr6g3028 344 Pfam Protein tyrosine and serine/threonine kinase 46 310 IPR001245 GO:0004672|GO:0006468
Tpr6g3028 344 Gene3D Transferase(Phosphotransferase) domain 1 126 338 - -
Tpr6g3028 344 PANTHER TYROSINE KINASE FAMILY PROTEIN 19 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3028 Tpr-Chr6 32911154 32913904 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3028 28 324 Receptor kinase-like Gene Family AT3G51550 39.617 2.72e-66 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3028 PK_Tyr_Ser-Thr 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3028 - - gmx:100779112 426.017