Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3027 ATGTTTGTAAAATATTCAAAGAATAAAAGTTCATCCAAGAAACAATACTCAACAATTATAGAAGAGCTATGCCATCAATTTTCTCTGGAAGATCTTAAGAAATCAACCAACAACTTTGATGAAGATCGAATAATTAGAAAATCACCATTCAGTATTGGGTACAAAGGTTATCTCAAACATAATGGCGAAATTGATTATCCGATAGCATTGAAGCGGATGAGAAATATATCAGACGAATGGAAGTTCAAGAAGGAAATTGAACTCCACTGCCAGCTTCATCACCCAAATTTGACATCATTAATAGGATTTTGTGACCAAAAAGATGAGAAAATTCTCGTGTATGACATGTTCAATGGAACTCTCTATGATCATTTACGTTCTACTGATATGGAATCACTGTCATGGAAGAAAAGGCTTGAAATATGCATTGGAGCTGCAAGAGGTCTACACTATCTACACACCGGAGCAAAGCGTACAATTTTTCATTGTGACATAAAGCCTCAAACTATTCTATTAGATAACAATATGGTACCAAAACTCTCGCATCTTGGATTTTCCTTGCAAGGGAAGCTTTCTAAATCGAATCCGAAATCAATTAAAGTTGACACCCTTATTGGTACATTGTTTTACATGGCACCGGAATACGTCCAAACCAGTACTTTCACGGATAAATGTGACGTTTATTCCTTCGGTATGGTTCTACTTGAAGTAGCATGCACAAACTACAACCTTACCATATTTGATAAGATGAGAATGTTTGAGAACCCGAATTTGTTTATAGAACAGTCAATTGAAGCAGCTAACTTTTTGGAGAAGTTCTCAGCTAATGAGATTATTGATCCAATTCTCATGAGATTGATTGCACCAAAATGTTTGGTGGTGTTCATGGATATCATGAAAAGATGTTTGAATATAGAACCAAATGAAAGACCAATAATAGGTGAGGTTGAGGTTGAACTTGAGCATGCTCTGGCACTCCAGAAGGAAGCAGATGATGGGAAAAGTAATGGTGATGATTATAACTTTTCCCTTACCACCATTCCTACCTAA 1050 0.36 MFVKYSKNKSSSKKQYSTIIEELCHQFSLEDLKKSTNNFDEDRIIRKSPFSIGYKGYLKHNGEIDYPIALKRMRNISDEWKFKKEIELHCQLHHPNLTSLIGFCDQKDEKILVYDMFNGTLYDHLRSTDMESLSWKKRLEICIGAARGLHYLHTGAKRTIFHCDIKPQTILLDNNMVPKLSHLGFSLQGKLSKSNPKSIKVDTLIGTLFYMAPEYVQTSTFTDKCDVYSFGMVLLEVACTNYNLTIFDKMRMFENPNLFIEQSIEAANFLEKFSANEIIDPILMRLIAPKCLVVFMDIMKRCLNIEPNERPIIGEVEVELEHALALQKEADDGKSNGDDYNFSLTTIPT* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3027 349 Pfam Protein kinase domain 65 314 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g3027 349 Gene3D Phosphorylase Kinase; domain 1 2 116 - -
Tpr6g3027 349 PANTHER TYROSINE KINASE FAMILY PROTEIN 10 338 - -
Tpr6g3027 349 PANTHER OS07G0166700 PROTEIN 10 338 IPR045272 GO:0004714|GO:0006468
Tpr6g3027 349 Gene3D Transferase(Phosphotransferase) domain 1 117 344 - -
Tpr6g3027 349 SUPERFAMILY Protein kinase-like (PK-like) 12 318 IPR011009 -
Tpr6g3027 349 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3027 Tpr-Chr6 32909794 32911035 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3027 6 332 Receptor kinase-like Gene Family AT3G51550 40.413 8.03e-65 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Tpr6g3027 Pkinase 6.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3027 - - mtr:MTR_7g015750 482.641