Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3026 ATGCATGATGAGGTGAAAATCATACATCAATGTCAAGTGAGTCCTCCACAAGGATCACTTCCATCTTCAATCACCCTTCCATTAAGTTACCTTGACCTCCCTTATTTTTATTGTCCCAATATCAAAAGAATTTTCTTCTACAACTTCCCTCACTCCACACAACATTTCCTTCAAACTTCACTCCCAATTCTAAAAGATTCTCTTTCCCTCACTCTGCAACATTTCTTCCCTTTTTCCTCTAAAATCATCTTCCCTCCTAAGCCTCAAAACCCTCACATTCTCTACTCTCAAGGTGACTCCATCACATTAACAATTTGTGAATCCAAATCAAACTTCAACTACCTAATATCCAATTCACCAAAAGATCTTAAAATTGCATACCCTTTTGCTTCCTTAATTCCATCACCAAGTATTATTTCACAAGATGGCACATTATTGTTACCAACATTTGCCATTCAAATCACTGTCTTTCCAAACTTTGGTTTCACAATTTGTCTCACTTTTAGACATGAAATTTGTGACGGTAAATCATTTCATCATTTCATTAAATTTTGGTCCTCACTTTCAAAAGGAAACGTAGAAAATTCTTCTCTTTCATTACCATTACACAATAGAGACATGATACATGACCCAAAAGAGCTTAAACAAAGTTTCTTAGAACAAATTTGGAATTCTCCACCAAATTTGGAATATACTAGTGCCAATAATAACTTGCTTCGTCATAGATTTATATTGACACATCACCAAGTTGAAAATTTGAAGAAATGGGTGCGTACAAAAAGTCAAACTATTGGTCTTGAAACACTTCATTTGTCAACCTTTGTTGTCACATGTTCTTTGTTTTGGATTTGTATGATAAAAACAAAATCACAAGACGACAAAAACAAAAGTACTATAGTTGATTGTGATTCCAACAATGATTTTGAAGATAATTACGGTTTTAGATTTCTAATGGATTTACGTAACCATTTTGAGGTTTCAACAAATTATTTTGGAAATTGTTTAGGTGCATGTGTTGCAACACTTCCAAAGTGGAAGTTGGTTGGAGAAAATGGTATTTGTGAAGCAGTTAATTCTATTGGAAGAGAAATTAAGAGTTTTAGTGATCCATTAATAGGGGTTGAAAAACTTATGTTTCATCAACGTATTAATGAGTCAGGTATAAAGTCACATAACATGATTCTTGCTGTGGGGTCACCAAAGTTTAATGTGTATGAAACTGATTTTGGTTGGGGAAAACCTTTATTGAGTGAAAACATTCATGTGGATAATTCAAGTATATTGTGTTTTTCTGATTCTAAAGATGAAGATTGTGTCATTGAAGTTGGGATGGTATTAGATGGGGATCAGATCAAAAAATTTAGTGATGTGTTAGAAGCGCAACTTAGAGATATTGTTGGACCTAAATGA 1410 0.3362 MHDEVKIIHQCQVSPPQGSLPSSITLPLSYLDLPYFYCPNIKRIFFYNFPHSTQHFLQTSLPILKDSLSLTLQHFFPFSSKIIFPPKPQNPHILYSQGDSITLTICESKSNFNYLISNSPKDLKIAYPFASLIPSPSIISQDGTLLLPTFAIQITVFPNFGFTICLTFRHEICDGKSFHHFIKFWSSLSKGNVENSSLSLPLHNRDMIHDPKELKQSFLEQIWNSPPNLEYTSANNNLLRHRFILTHHQVENLKKWVRTKSQTIGLETLHLSTFVVTCSLFWICMIKTKSQDDKNKSTIVDCDSNNDFEDNYGFRFLMDLRNHFEVSTNYFGNCLGACVATLPKWKLVGENGICEAVNSIGREIKSFSDPLIGVEKLMFHQRINESGIKSHNMILAVGSPKFNVYETDFGWGKPLLSENIHVDNSSILCFSDSKDEDCVIEVGMVLDGDQIKKFSDVLEAQLRDIVGPK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3026 469 Pfam Transferase family 5 459 - -
Tpr6g3026 469 Gene3D - 235 464 IPR023213 -
Tpr6g3026 469 PANTHER - 3 466 - -
Tpr6g3026 469 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 3 466 - -
Tpr6g3026 469 Gene3D - 4 233 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3026 Tpr-Chr6 32897975 32899384 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3026 31 458 Monolignol Biosynthesis Gene Families AT5G48930 18.124 1.68e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3026 - - mtr:MTR_7g015860 646.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0224 2 2903714 2905637 Tpr6g3026 6 32897975 32899384 PCT