Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g3022 ATGAGTTTTTCTTTGTTATCTAAAACAACTCCTTGCATTTTTTTCTTCATTCTACTTTCTTCCACTTGCTTCATTTCAACAGATGCTTATGACCCACTTGACCCAAACGGGAATATCACAATCAAATGGGATGTTGTGCAATGGACACCTGATGGTTATATGGCTGTTGTTACGATGACAAACTTCCAACAATATCGACACATTGATGCGCCCGGCTGGTCCCTAGGATGGACGTGGGCGAAAAAGGAGGTAATCTGGAGCATGGTGGGATCGCAGACCACTGAACAGGGTGACTGTTCAAAATTCAAAGGTAATGTTCCACATTGCTGTAAGAAGAACCCGACTGTTGTTGATTTTCTTCCGGGTACACCATACAACCAACAAGTCGCGAATTGCTGCAAAGGCGGGGTGCTCAGTTCGTGGGCACAGGATCCTACCAATGCAGTGGCGTCATTTCAAATCAGCGTTGGTAGGGCTGGAACCACAAACAAAACGGTTAAAGTCCCTAAAAACTTCACCTTGAAAGCACCCGGACCCGGTTATACTTGTGGGCCGGCGAAAATTGTGAGACCTACTCAGTTTATTCAACCAGATAAACGGAGAGTAACACAAGCACTCATGACTTGGAATGTTACGTGCACGTATTCTCAATTTCTAGCGCAGAAAACTCCCACTTGTTGTGTTTCCCTTTCAGCTTTCTATAACGACACGATTGTACCCTGCCCAACGTGTGCATGTGGCTGCCAAAGTAACTCATCTCAGTCGGGTAGTTGTGTAAATCCAAATACGCCACATTTAGCCTCGGTTGTTGCTGGTAACGGAAAGAATAATTTATCACCTTTGGTGCAATGTACCAGCCATATGTGCCCAATCCGTATCCATTGGCATATCAAAGTTAACTACAAGGAATACTGGCGTGTGAAGGTTTCTATAACTAATTTTAATTACCGTATGAATTACTCCAATTGGAATTTGGTAGTCCAGCATCCAAACTTTGACAATCTGACCCAGTTATTCAGTTTCGACTACAAGTCATTAAATCCTTATGGTTCAATAAATGATACAGCAATGTTGTGGGGAGTGAAGTTCTATAATGATTTTCTTAATCAGGCTGGCCCTAGCGGCAATGTTCAATCTGAGCTACTCTTCCGAAAGGAGGATATGTCACATTTCAGTTTTGGGAAGGGTTGGGGTTTCCCTCATAGAATCTACTTCAATGGTGACAACTGTGTGATGCCACCGCCCGATGCATATCCATGGTTACCTAATGCTGGTTATCGGCAAGAGGTTTCATTGTTTGCTTTAGTAACGGCCTCCTTGGTAGTCTTAGTATTTTATGCATACATTTAA 1350 0.4311 MSFSLLSKTTPCIFFFILLSSTCFISTDAYDPLDPNGNITIKWDVVQWTPDGYMAVVTMTNFQQYRHIDAPGWSLGWTWAKKEVIWSMVGSQTTEQGDCSKFKGNVPHCCKKNPTVVDFLPGTPYNQQVANCCKGGVLSSWAQDPTNAVASFQISVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVRPTQFIQPDKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSAFYNDTIVPCPTCACGCQSNSSQSGSCVNPNTPHLASVVAGNGKNNLSPLVQCTSHMCPIRIHWHIKVNYKEYWRVKVSITNFNYRMNYSNWNLVVQHPNFDNLTQLFSFDYKSLNPYGSINDTAMLWGVKFYNDFLNQAGPSGNVQSELLFRKEDMSHFSFGKGWGFPHRIYFNGDNCVMPPPDAYPWLPNAGYRQEVSLFALVTASLVVLVFYAYI* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g3022 449 PANTHER PROTEIN COBRA 7 448 IPR006918 GO:0010215|GO:0031225
Tpr6g3022 449 PIRSF COBRA 2 449 IPR006918 GO:0010215|GO:0031225
Tpr6g3022 449 PANTHER COBRA-LIKE PROTEIN 7 448 - -
Tpr6g3022 449 Pfam COBRA-like protein 53 216 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g3022 Tpr-Chr6 32875180 32879368 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g3022 1 444 COBRA Gene Family AT3G02210 71.903 0.0 682
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g3022 - - gmx:100783820 835.869
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0218 2 2875505 2879506 Tpr6g3022 6 32875180 32879368 PCT