Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2982 ATGACAATAGGAAATCTTGCACCTAAGACAGAGAAGAAGAAATCATCATCAAGAAAGAGCAAGAACAAGGCTATTGTTAGTGAAAATACACCTTTGTTGCCCAAAAGTCAAGCCCATGAAAGTGATTCTGGGTTTGATGATTTCAATGGAGCTTCATTTTCTGGTGCTGTTTTCAACTTGGCAACTACAATTATTGGTGCTGGAATCATGGCTTTGCCTGCAACCCTGAAACAGTTGGGATTGGTTCCTGGTCTTGCTGCTATACTCATCATGGCTTTTTTGACTGAGAAGTCAATTGAGCTTTTGATTAGGTTTACAAGGGCAGGGAAATCTGTTTCATATGCTGGTTTGATGGGTGATTCCTTTGGGAAATATGGAAAAGCTTTGGCACAAATTTGTGTTATTGTTAATAACATTGGTGTGCTGATTGTTTACATGATTATTATTGGTGATGTGCTTTCTGGAACATCATCAAGTGGAGAACATCACTATGGTATCCTTGAAGGATGGTTTGGCGTGCACTGGTGGACTGGACGGACATTTATTGTCCTTCTTACGACGGTTGCTGTATTTGCACCCCTCGCAAGCTTTAAGCGAATTGATTCGTTGAGATTCACATCTGCACTTTCCGTTGCACTGGCGGTCATTTTTCTTGTCATTGCTGTGGGAATTTCTGTTGTGAAGATTATAAGTGGAGGCATTACCATGCCGAGACTCTTCCCAGCTGTTACTGATGCAACATCAATCTTTAACCTATTCACTGTGGTTCCTGTGTTTGTGACTGCTTATATCTGCCACTACAATGTTCACAGCATAGATAATGAGCTCGAGGACAACTCACAGATGCAAGGCGTTGTACGTACTGCCCTCGGTCTATGCTCATCCGTGTACTTAATGATAAGCTTCTTTGGTTTCCTTTTATTTGGCGAAGGAACTCTTGATGATGTGCTTGCCAATTTCGATGCCGATCTTGGAATTCCTTTTGGTTCTTTGCTCAACGATGCTGTTCGTATTAGCTATGCTGCACATCTCATGCTTGTATTTCCGGTTGTCTTTTTTCCATTGCGACTCAATATAGATGGTCTTCTCTTCCCTAAGTCAAGACCTTTGGTTCTAGATAACTTCAGATTTGCATCAATGACTGTTGCCCTTATCGGTGTTATCTTCCTTGGAGCAAATTTCATTCCTAGCATTTGGGATGCTTTCCAGTTCACTGGAGCAACCGCTGCAGTTTGTATAGGATTCATCTTTCCAGCTGCCATCACACTTAAGGACCGCTACAACATAGCGACTAGATCGGACAAGATTCTATGTGTTGTTATGATTGTCCTTGCAGTCTTCTCAAACATTATTGCTATATACAGTGACGCCTATGCATTGATCAAGCAGAACAATACTTCACGTGAATGA 1410 0.4156 MTIGNLAPKTEKKKSSSRKSKNKAIVSENTPLLPKSQAHESDSGFDDFNGASFSGAVFNLATTIIGAGIMALPATLKQLGLVPGLAAILIMAFLTEKSIELLIRFTRAGKSVSYAGLMGDSFGKYGKALAQICVIVNNIGVLIVYMIIIGDVLSGTSSSGEHHYGILEGWFGVHWWTGRTFIVLLTTVAVFAPLASFKRIDSLRFTSALSVALAVIFLVIAVGISVVKIISGGITMPRLFPAVTDATSIFNLFTVVPVFVTAYICHYNVHSIDNELEDNSQMQGVVRTALGLCSSVYLMISFFGFLLFGEGTLDDVLANFDADLGIPFGSLLNDAVRISYAAHLMLVFPVVFFPLRLNIDGLLFPKSRPLVLDNFRFASMTVALIGVIFLGANFIPSIWDAFQFTGATAAVCIGFIFPAAITLKDRYNIATRSDKILCVVMIVLAVFSNIIAIYSDAYALIKQNNTSRE* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2982 469 MobiDBLite consensus disorder prediction 1 36 - -
Tpr6g2982 469 MobiDBLite consensus disorder prediction 22 36 - -
Tpr6g2982 469 Pfam Transmembrane amino acid transporter protein 51 454 IPR013057 -
Tpr6g2982 469 PANTHER AMINO ACID TRANSPORTER AVT6A 14 467 - -
Tpr6g2982 469 PANTHER AMINO ACID TRANSPORTER 14 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2982 Tpr-Chr6 32368108 32373120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2982 3 469 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.951 0.0 641
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2982 K14207 - gmx:100796345 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0201 2 2612481 2619737 Tpr6g2982 6 32368108 32373120 PCT