Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2979 ATGCAAACCACAGAGATTAATACAGGACTCAATTATTTACTCCCAAATTCAATTCCATCTTATCCATCATGTAACTTCAACATGATCCAAAACACCTTACCAAATCCTCAACTTCAAAAATACTCAAACCAATTTTATGGTTTCAACCAAAACCCTCTTCAAATTCTTCAAGACTTTAGTCCACAATCCTCATGCCTAAGTAGCAACTCAACTTCGGACGAAGCAGACGAACAAAATAAAGGACTAATCAACGAAAGAAAACACCGAAGAATGATATCAAACCGCGAGTCAGCGCGTAGGTCAAGAATGAGGAAACAAAAACAACTTGATGAGCTTTGGTCACAAGTTGTTTGGCTAAGGAATGAGAATCATCAACTACTTGATAAGCTTAACAATTTTTCAGAAACTCATGATAGAGTTGTTCAAGAGAATGTTCAATTGAAAGAAGAAGCTTCGGAACTTCGACAAATGGTTTGTGACATGCAGTTACATAGTTCATGTCTTCCTTTGAGTCCTTTTCAAGATGTTGCTAGCATCACTTCACCTCATGTTAAATCTGATTCCTCAAACCAATCAAACACAAATTCTGATGATCTTTTAGGATGA 606 0.3647 MQTTEINTGLNYLLPNSIPSYPSCNFNMIQNTLPNPQLQKYSNQFYGFNQNPLQILQDFSPQSSCLSSNSTSDEADEQNKGLINERKHRRMISNRESARRSRMRKQKQLDELWSQVVWLRNENHQLLDKLNNFSETHDRVVQENVQLKEEASELRQMVCDMQLHSSCLPLSPFQDVASITSPHVKSDSSNQSNTNSDDLLG* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2979 201 MobiDBLite consensus disorder prediction 64 85 - -
Tpr6g2979 201 PANTHER BZIP TRANSCRIPTION FACTOR 1 201 - -
Tpr6g2979 201 SUPERFAMILY Leucine zipper domain 86 135 IPR046347 GO:0003700|GO:0006355
Tpr6g2979 201 CDD bZIP_plant_GBF1 87 138 IPR045314 GO:0003700|GO:0006355
Tpr6g2979 201 Gene3D - 84 139 - -
Tpr6g2979 201 Pfam bZIP transcription factor 86 136 IPR004827 GO:0003700|GO:0006355
Tpr6g2979 201 SMART brlzneu 82 146 IPR004827 GO:0003700|GO:0006355
Tpr6g2979 201 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 89 104 IPR004827 GO:0003700|GO:0006355
Tpr6g2979 201 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 84 147 IPR004827 GO:0003700|GO:0006355
Tpr6g2979 201 Coils Coil 130 157 - -
Tpr6g2979 201 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 201 IPR044521 -
Tpr6g2979 201 MobiDBLite consensus disorder prediction 181 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2979 Tpr-Chr6 32328949 32329827 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2979 45 175 bZIP Transcription Factor Family AT3G30530 67.164 3.45e-51 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Tpr6g2979 bZIP_1 5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2979 - - aprc:113863596 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr2g0197 2 2543168 2544043 Tpr6g2979 6 32328949 32329827 PCT