Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2954 ATGTTTCCTTCTACTTATTGCTCTTTAGGTCCTTACCCTTGTTATAATCCTAATTCATCTTCTTCATCGCATTCATACCCTCCTTTTACTTTTCTTACCCCTGATCAAAATGTTTCTTCAAACAACACCACCAACAACAATAACAACAACATCAATACTTTTCTTCACGATCCAACTATTTCTATTCCCTACACACAAACAACTCATCATCATCATGTTCCAATTAATCCTGAAACAGTAACAAATTGGGCTGTTGCTGACTACGCCGCAATGTTGAAACAAGATCTAAGTGGTACTTCTCATTATGGTAGTATCTCAAATTTGCTTGCAAAGAAACCGGTTAAAAAACCGGTGAAGAAAGACCGGCACAGCAAGATTCATACATCTCAAGGTTTGAGAGATAGAAGGGTAAGACTTTCGATTGAGATAGCGCGAAAGTTCTTCGATCTTCAAGACATGTTAGGGTTTGACAAAGCTAGTAACACACTTGAATGGCTCTTCAACAAATCAAAAGAGGCAATTGAAGAATTAACTAGAAGCAAGAACAACATAGGTTCCGGTGATGATGACGATGATCGTAGCTTCTCTTCTTCGTCTTCTGATGAAGGAGACGAAGAAGTAAGAAAGATGAAAAGGGCACAAAAAGAATCTTCAAAGATGAAAGATTCAAAGGAAAAATCAAGAACAAGAGCAAGGGAAAGAACAACTGAGATGATGATACAAGATTTGAAAGAAAAATACCCTGAAAATGTTCAAAATCAACAAATCCTTCATCAATTGATGCCTAATGATGAAGAAAGTTCAAAATCACTTCAAAGAGATGATATTTTTAACTTTATTGAGGAATCAATTGTGATTAAAAGAAAGTTAAAGAAATCTTCTCATCATCATCATCATCATCAACAAAACAATTTGATGATCCCTAAGGAAACAAGTTTTGATCAAAACAGTGATTGTCATGACTCTCCAATGTTATCACCAAATTGGGATGCTAATAATAACAATTCTACTTCTGGAAGATCCAACTTTTCTGCAATATCAAGAATGAATCTATCATCAGGGCTTCAAATCTTTGGAAAATCATGGGAGGATTGCAATACAAGTCCAAATCGATATTAG 1119 0.3521 MFPSTYCSLGPYPCYNPNSSSSSHSYPPFTFLTPDQNVSSNNTTNNNNNNINTFLHDPTISIPYTQTTHHHHVPINPETVTNWAVADYAAMLKQDLSGTSHYGSISNLLAKKPVKKPVKKDRHSKIHTSQGLRDRRVRLSIEIARKFFDLQDMLGFDKASNTLEWLFNKSKEAIEELTRSKNNIGSGDDDDDRSFSSSSSDEGDEEVRKMKRAQKESSKMKDSKEKSRTRARERTTEMMIQDLKEKYPENVQNQQILHQLMPNDEESSKSLQRDDIFNFIEESIVIKRKLKKSSHHHHHHQQNNLMIPKETSFDQNSDCHDSPMLSPNWDANNNNSTSGRSNFSAISRMNLSSGLQIFGKSWEDCNTSPNRY* 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2954 372 ProSiteProfiles R domain profile. 221 238 IPR017888 -
Tpr6g2954 372 MobiDBLite consensus disorder prediction 179 235 - -
Tpr6g2954 372 Pfam TCP family transcription factor 118 237 IPR017887 -
Tpr6g2954 372 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 25 372 IPR005333 GO:0003700
Tpr6g2954 372 ProSiteProfiles TCP domain profile. 119 177 IPR017887 -
Tpr6g2954 372 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 25 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2954 Tpr-Chr6 31913947 31915898 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2954 112 242 TCP Transcription Factor Family AT1G67260 48.734 5.11e-36 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr6g2954 TCP 2.8e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2954 - - cam:101489716 419.468