Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2947 ATGGGGTTGATTTGTGGATGTGGTTTTGTTTTTTGTGTTTTGATGTTTAAGAAAAGACAAACTTTTTTTTATCTTGCAAAGGAATTGTTGGTATTTCAGCCACTTGTTCTTCTTCTGTTCTTGTTCAGTTTGCATTATAACACTGTGCAATGTGAAGGAAGATTGAGTAAAAACATATCTTCTGAGACTTCATCACAATCAGATTACAAAGATAATCCTAGGAAGGTTATTGTTAGCATAGTTTTAGGAGCAGTCACTGGATTAATTGGTTCTGTTCTCTTTGCATTTGTGATTCGTTGTATTGTTCGGTATCTTAACCGAACACCAATCCTCAAAGGACCTGTCATATTCTCCCCCAAAATTGCCTCAAAGACACTCCAATTAGCTTTGTCAAAAGAAAACCATTTACTTGGTTCAAGTCCAAATGGGAAATACTACAAAACTGTTCTTGAAAATGGTCTCACAATTGCAGTCAAAAGGCTAACACCTTTTGAGAGCAATTCACCAGAGAGTAGGAGAAAATCAGTGAAGAGGCAAATACAGATGGAGTTAGAGCTTCTTGCTAGCTTAAGACATAGGAATTTGATGAGTTTAAGGGCTTATGTTCGCCAAAATGATGGATTCTCGTTGGTTTATGATTATGTATCAACTGGAAGTCTTGCAGATGTGATGAATAGAGTGAGGGAAAATGAGTTGCAGATTGGTTGGGAAGTTAGGTTAAGGATTGCTGTTGGTGTGGTGAAGGGTCTTCAATATCTTCATTTCACTTGTGTGCCACAGATTTTGCATTTCAATTTGAAGCCTACTAATGTGATGTTGGATGCTGAGTTTGAACCTAGATTGGCTGATTATGGATTGGCTAAACTTCTACCAAACTTAGATAGAGGGATATCTCTCAACACCCCTCCTGAATGTTTACATAATCGCAGCAGGTACACTGAAAAGAGTGACATATTCGGTTTCGGCATGATACTAGGTGTTTTATTAACTGGTAAGGATGCTGCGGATCCATTCTTTGGAGAAGCAAGCAGAGGAGGAAATTTGGGATGTTGGCTACGACACTTGAAGCAAGCCGGCGAGGAACGAGAAGCTCTAGATAAGAGTATTTTGGGGGAACAAGGTGAAGAAGATGAGATGCTAATGGCTGTTGGGATTGCTGCAGCTTGCTTATCTGATATGCCTGCTGATAGACCTTCCAGTGATGAACTTGTTCACATGCTAACACAACTCAATAGTTTTTGA 1242 0.3913 MGLICGCGFVFCVLMFKKRQTFFYLAKELLVFQPLVLLLFLFSLHYNTVQCEGRLSKNISSETSSQSDYKDNPRKVIVSIVLGAVTGLIGSVLFAFVIRCIVRYLNRTPILKGPVIFSPKIASKTLQLALSKENHLLGSSPNGKYYKTVLENGLTIAVKRLTPFESNSPESRRKSVKRQIQMELELLASLRHRNLMSLRAYVRQNDGFSLVYDYVSTGSLADVMNRVRENELQIGWEVRLRIAVGVVKGLQYLHFTCVPQILHFNLKPTNVMLDAEFEPRLADYGLAKLLPNLDRGISLNTPPECLHNRSRYTEKSDIFGFGMILGVLLTGKDAADPFFGEASRGGNLGCWLRHLKQAGEEREALDKSILGEQGEEDEMLMAVGIAAACLSDMPADRPSSDELVHMLTQLNSF* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2947 413 Gene3D Phosphorylase Kinase; domain 1 118 214 - -
Tpr6g2947 413 Pfam Protein kinase domain 133 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2947 413 ProSiteProfiles Protein kinase domain profile. 131 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2947 413 SUPERFAMILY Protein kinase-like (PK-like) 134 408 IPR011009 -
Tpr6g2947 413 Gene3D Transferase(Phosphotransferase) domain 1 215 412 - -
Tpr6g2947 413 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE CORYNE 32 413 - -
Tpr6g2947 413 PANTHER - 32 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2947 Tpr-Chr6 31839618 31842618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2947 77 410 Receptor kinase-like Gene Family AT2G31880 32.958 1.00e-55 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-2 Tpr6g2947 Pkinase 1.1e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2947 - - gmx:102664273 651.744