Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2943 ATGAAAAAAGGTGAAAATGCACTCTTCACCATCCCTCCCGAGCTAGCTAATTATGGTGAATCTGGTTCACCTCCAACAATTCCTCCTAATGCAACACTCCAATTTGATGTCGAGCTGTTGTCTTGGACAAGTGTGAAGGACATATGTAAAGATGGCGGTATATTTAAGAGGATACTTACTGAGGGGGAGAAATGGGAGAATCCCAAGGATCCTGATGAAGTATTGGTTAATTATGAGGTTCGTCTCGAGGATGGAAAGGTTGTAGCAAAGTCGGATGGAGTGGAGTTCACTGTCAGTGAAGGTCATTATTGCCCTGCACTCTCAAAGGCTGTTAAATCCATGAAGAAGGGAGAGAAAGTGATTTTATTAGTAAAGCCTCAATATGGATTTGGTGAGAAGGGGAAGCCAGTGCATGGTGATGAAGGTGCAGTTCCACCAAATGCATCACTCCAGATTACACTTGAGTTGGTTTCTTGGAAGACTGTTTCAGATGTGACTAGCGACAAGAAGGTCATAAAGAAGATCCTCAAGGAAGGGGAAGGATTTGAGCGTCCAAATGAAGGGGCCGTTGTAAAATTGAAACTAATTGGTAAGCTGCAAGATGGTACTGTCTTTTTTGAAAAGGGCCGTGACAATGAAGAGAAGCTGTTTGAATTCAAAACAGATGAGGAGCAAGTCATTGATGGACTAGATAAAGTTGTAATGACTATGTGGTGTTTGATGTGTTTGATGTATTTTTTTGTTCTTTTGGTTCAGTTATGTGGTGTGGTCTTGTAG 777 0.417 MKKGENALFTIPPELANYGESGSPPTIPPNATLQFDVELLSWTSVKDICKDGGIFKRILTEGEKWENPKDPDEVLVNYEVRLEDGKVVAKSDGVEFTVSEGHYCPALSKAVKSMKKGEKVILLVKPQYGFGEKGKPVHGDEGAVPPNASLQITLELVSWKTVSDVTSDKKVIKKILKEGEGFERPNEGAVVKLKLIGKLQDGTVFFEKGRDNEEKLFEFKTDEEQVIDGLDKVVMTMWCLMCLMYFFVLLVQLCGVVL* 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2943 258 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 169 237 - -
Tpr6g2943 258 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 167 - -
Tpr6g2943 258 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 1 43 IPR001179 GO:0003755
Tpr6g2943 258 SUPERFAMILY FKBP-like 1 48 - -
Tpr6g2943 258 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 66 156 IPR001179 GO:0003755
Tpr6g2943 258 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 184 237 IPR001179 GO:0003755
Tpr6g2943 258 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 1 40 IPR001179 GO:0003755
Tpr6g2943 258 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 71 160 IPR001179 GO:0003755
Tpr6g2943 258 Gene3D - 45 160 IPR046357 GO:0003755
Tpr6g2943 258 Gene3D - 161 239 IPR046357 GO:0003755
Tpr6g2943 258 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 188 237 IPR001179 GO:0003755
Tpr6g2943 258 PANTHER PEPTIDYLPROLYL ISOMERASE 1 167 - -
Tpr6g2943 258 PANTHER PEPTIDYLPROLYL ISOMERASE 169 237 - -
Tpr6g2943 258 SUPERFAMILY FKBP-like 47 163 - -
Tpr6g2943 258 Gene3D - 1 44 IPR046357 GO:0003755
Tpr6g2943 258 SUPERFAMILY FKBP-like 165 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2943 Tpr-Chr6 31808466 31811076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2943 1 237 Calmodulin-binding Proteins AT3G25230 78.481 1.60e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2943 K09571 - gmx:100812632 426.787