Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2937 ATGTCTTCTCAACTTTGTTGTTGTTCCATTGCAATGTGTCTTGCAATTCTACTTCAACTATGTTCCTTAGGAGTTTCACTTTCACACCCAAACAAGATCACACATTTACCAGGTCAACCACATGTTGAGTTTCATCATTTTTCAGGTTATGTAAATGTTAATGACAAAAACAAAAAAGCACTTTTTTTCTACTTTGTTGAAGCTCAACAAGATGCAGCTTCAAAACCACTTGTTCTTTGGCTTAATGGAGGGCCTGGTTGTTCTTCTCTTGGTGTTGGTGCATTTTCAGAAAACGGTCCTTTTAGGCCTAAAGGAGATGCCTTGGTTAAGAACCAATTCAGCTGGAATACAGAAGCAAATATGTTGTATTTGGAATCACCAATTGGAGTAGGCTTTTCATATTCAACTGAAACTTCATCTTATGAAGGTGTAAATGACAAGATTACAGCCAGGGATAATCTAATCTTCTTGCAAAACTGGTTTGTAAAGTTTCCAGAATACAGAAACAGAAGTTTGTTCATTGTAGGAGAGAGTTATGCCGGTCATTATGTTCCTCAATTGGCTGAGCTTATGCTCCAATTCAACAAAAAGAAGAAGTTGTTCAATTTAAAAGGCATTGCTATTGGTAATCCAGTTCTAGAATATGCAACAGATTTTAATTCAAGAGCTGAGTTCTTTTGGTCGCACGGATTGATCTCAGACTTAACATACAAAATGTTCACGTCTGTGTGTAACTATTCAAGATATGTAAGAGAATACTATAACGGCGCCGTTTCTCCGATTTGTTCAAGTGTAATGAGCCAAGTTAGTACAGAAACAAGTAGATTTGTTGACAAGTATGATGTGACACTTGATGTTTGTATATCTTCTGTTTTTTCACAAACCAAAGTCCTCAATCCTCAGCAAGTGACTGAAAAAATTGATGTTTGCGTCGAAGACGAAACAGTCAAATATCTTAACAGGAAAGATGTTCAATCGGCTTTACAGGCACGTCTAGTTGGCGGCATAAAAAGATGGTCTCCTTGCAGCAATGTTTTGGATTATGACTTGCGGGACTTGGAGATACCGACAATCACGGTTGTAGGCAAGCTAGTCAAGGCAGGAATTCCGGTATTGGTCTACAGTGGTGATCAAGATTCAGTTATCCCATTGACTGGAAGTAGAACTTTAGTACGTCAATTGGCGAAAGAATTGAGAATCAATACAACTGTGCCATACAGGGTGTGGTTTGAAGGACAGCAGGTGGGTGGTTGGACTCAAGTTTATGGTAACATACTATCATTTGCTACAGTCAGAGGAGCATCACATGAAGCACCATTTTCACAGCCTGAGAGATCACTTGTGCTATTCAAGTCATTCTTAGAAGGAAGACCTCTACCAGAAGAATTTTGA 1392 0.3865 MSSQLCCCSIAMCLAILLQLCSLGVSLSHPNKITHLPGQPHVEFHHFSGYVNVNDKNKKALFFYFVEAQQDAASKPLVLWLNGGPGCSSLGVGAFSENGPFRPKGDALVKNQFSWNTEANMLYLESPIGVGFSYSTETSSYEGVNDKITARDNLIFLQNWFVKFPEYRNRSLFIVGESYAGHYVPQLAELMLQFNKKKKLFNLKGIAIGNPVLEYATDFNSRAEFFWSHGLISDLTYKMFTSVCNYSRYVREYYNGAVSPICSSVMSQVSTETSRFVDKYDVTLDVCISSVFSQTKVLNPQQVTEKIDVCVEDETVKYLNRKDVQSALQARLVGGIKRWSPCSNVLDYDLRDLEIPTITVVGKLVKAGIPVLVYSGDQDSVIPLTGSRTLVRQLAKELRINTTVPYRVWFEGQQVGGWTQVYGNILSFATVRGASHEAPFSQPERSLVLFKSFLEGRPLPEEF* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2937 463 ProSitePatterns Serine carboxypeptidases, histidine active site. 426 443 IPR033124 GO:0004185
Tpr6g2937 463 PANTHER CARBOXYPEPTIDASE 7 461 - -
Tpr6g2937 463 SUPERFAMILY alpha/beta-Hydrolases 33 460 IPR029058 -
Tpr6g2937 463 Gene3D alpha/beta hydrolase 28 289 IPR029058 -
Tpr6g2937 463 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 7 461 IPR001563 GO:0004185|GO:0006508
Tpr6g2937 463 Gene3D - 310 347 - -
Tpr6g2937 463 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Tpr6g2937 463 Gene3D - 358 456 - -
Tpr6g2937 463 Pfam Serine carboxypeptidase 38 456 IPR001563 GO:0004185|GO:0006508
Tpr6g2937 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Tpr6g2937 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Tpr6g2937 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Tpr6g2937 463 PRINTS Carboxypeptidase C serine protease (S10) family signature 426 439 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2937 Tpr-Chr6 31772968 31777635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2937 318 459 Calmodulin-binding Proteins AT2G22960 30.282 3.25e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2937 K16297 - gmx:100789658 789.645