Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2934 ATGACCATGGTTCCTTCTCAGAGCAACAAACAAAATTACAAAACTATTAATGGTGATTATGTTTTCTACAACAACAATACAACAACAAGTGCTATGAACCAATTTCAATTTGTTGAAGACTACAACAACTACAATAATTGTTTAAGATCTGAATTTTTGTTGAGGCACATGGCTGAAGAAGAAGAATCATCATCAAGACTCAACACTATCACAACTACTCATCACAACGAATCTGAACCTGAACTCGAACCCGAACCAGAAACTATTTCTACTTCAAAGGAAGAAGAAGAACAAGAACAAAATAATTCAAACAACAACAATAATTGGCTTCAACTAAGCATAGGTAACACGGTCGTGACAACAACCTCAAAACACGACCGTGATCACAACCAAGCTCCAACAACCAGTTCAGGTTTATTGGAGCTTGAGTTATTACCAACAAATTGGACTTCTTCACGGCCCAATTTAGAGCAACCATCGATTAGAGGTTGCTCAACTTTTAATTCTTCTTTGTTTTTAGAACAAACAACATCCTCTTCTTCTTCGTCATCGATGTCCATATCTATGTCCATGCCGAGCGGGCCAACATACGGTCATCAACAACAACAACATCAACATCTAGTACCACATAACTGGGCATTTGGTCCATTACATCTACCACATTCTATGGCAATTATGCATTCTTCTACATCTTATATTCCCTCTTTATCTTCTTCGTCGCAATCTTGCTCTTCTTTAAGGCCTTCTTTAGGACCTAATTATTATCCTCAATATCATCATGCATCACCCTTTTATTTTCCTTCATCATCTTCATCTTCTTCTGGATTTGATCAATTTGATGTGGCTGGACCTAGCTCATCATCTCATATCGCTTTTCGCGTAGTTGATCCTCCTCGTAGACCTCATTCCGGAATTTGGTTTATGCTACAAGCTTCACAAAACCAAGTGAAAGAACCATGCTTGCCACAAATACCTAAGAACTATCTTAGAATCAAAGATGGAAGAATGACAGTTCGGTTGCTGTTGAAGTATTTGGTTAGTAAACTAAAGCTGGAGAGCGAATCAGAGATAGAGATAACATGCAGAGGACAACAACTTTTACCTTTCTTGACGTTGCAGCATGTGAGGGATAATATTTGGACCCCAAGGGACACTACAACAAGGCCTTTGCTTTCAGATTCCTCAACAGCAGATCATGTTATGGTGCTTCATTATGGTAGAAGCACTTCTTGA 1233 0.3852 MTMVPSQSNKQNYKTINGDYVFYNNNTTTSAMNQFQFVEDYNNYNNCLRSEFLLRHMAEEEESSSRLNTITTTHHNESEPELEPEPETISTSKEEEEQEQNNSNNNNNWLQLSIGNTVVTTTSKHDRDHNQAPTTSSGLLELELLPTNWTSSRPNLEQPSIRGCSTFNSSLFLEQTTSSSSSSSMSISMSMPSGPTYGHQQQQHQHLVPHNWAFGPLHLPHSMAIMHSSTSYIPSLSSSSQSCSSLRPSLGPNYYPQYHHASPFYFPSSSSSSSGFDQFDVAGPSSSSHIAFRVVDPPRRPHSGIWFMLQASQNQVKEPCLPQIPKNYLRIKDGRMTVRLLLKYLVSKLKLESESEIEITCRGQQLLPFLTLQHVRDNIWTPRDTTTRPLLSDSSTADHVMVLHYGRSTS* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2934 410 MobiDBLite consensus disorder prediction 76 100 - -
Tpr6g2934 410 Gene3D - 299 393 - -
Tpr6g2934 410 MobiDBLite consensus disorder prediction 178 205 - -
Tpr6g2934 410 MobiDBLite consensus disorder prediction 62 111 - -
Tpr6g2934 410 PANTHER RING FINGER PROTEIN 1 408 - -
Tpr6g2934 410 PANTHER RING FINGER PROTEIN 1 408 IPR044171 GO:0007275
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2934 Tpr-Chr6 31737101 31750537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2934 321 405 C3H Transcription Factor Family AT3G23060 40.449 1.06e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2934 - - mtr:MTR_7g021270 478.404