Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2929 ATGGCTTCAAGCAGCAACGATAGTACCATTGAAAGTAGATGCAACAACTTCTCTTCTGCTATGAACACATTGCCAAATACTAATGATTATGATGTGTTTGTTAGCTTTAGAGGTAAAGACACACGCCATAGTTTCACCGATCATCTTTTTGGTGCCCTCCGAAGAAAAGGCATTCTTGCATTTAGAGATGATACAGCTCTCATTAGAGGTAAATCTATAGCACCTGAGCTTCTTCGCGCAATTGAAAGCTCTAAGATTTACGTTATAGTATTCTCTGAAAACTATGCTTCTTCAACTTGGTGCTTGCAAGAATTAGAAAATATCATTCAATGTGAACAACGATCGGGAAAAGGTGTTCTACCTGTTTTCTATGATGTTGATCCATCTGTGGTGCGATTAGAAACAGGATATTATGTTGAAGCTCTTGCCGAACATGAAAATTATCACGACCCAGAGCTCGTGCAAAGATGGAGGGTTGCTTTGGCTAAAGTGGCCAATCTCGCTGGATGGCATATGCGTAATATGCCACAATATGAAGAGATTGAAAAGATTGTTCAAGAGATAATAAGAAGGTTTGGTTACAAGTTTTCTTGTCTTGCAAATGATTTAGTAGGAACCCTTACTCCTATAGCAGAATTGGAAAAGTGCTTACTTTTGAACTCGATTAGTGATGTTCGGGCTGTTGGAATTTGTGGGATGGGTGGAGTAGGGAAGACGACTATTGCTTCTCTTTTATATGGCAAAATCTCTCATCAATTCAATGCAGGTTGTTTTATTGACGATGTGAGCCAATTTTTTAAATATTACGGTCCACTTGGTGTACAAAAGCAAATTCTACATCAAACTCTTGGTGAAGAACACAAACAAATATACAATCATTATGACGGAACTAATTTGATACAAAGTAGGCTACGTCATCTTAAGGCTCTTATAGTTTTTGATAATGTTGATCAAAGTGAACAATTGGAGAAACTAGCCTTGTATCCTAAAGTTTTAGGTGAAGGGAGTAGAATCATTATAGTGTGCAGAGATTCTCATATCTTGAAAGAGTATGAAGTGGACGCACTTTACAAAGTTCAAACCTTGAATGACATGAACTCTCTTCAATTATTTTGTCGAAAAGCTTTCAAACTTGATAATATTAAGAGTGTTCGTTATAAGGAGTTGACACATGATATACTTAATATCGTTGATGGCTTACCATTAGCGATTAAAGTGTTAGGTTCATTTTTGTTTGATCGAACTATCTCTGAATGGAGAAGTGCATTGATTAGATTGAAAGAAAATCCAAACAAAGATATTATGAATGCACTTCAGTTAAGTATTTATGGGCTAGAGAAAGTGGAATTACAAATATTTCTTGATATTGCTTGTTTTTTCGACGGGAAAGAAGAAAAATATGTCAAAAATGTTTTAAATTGTTGTGGATTTCACCCTGATATTGGATTAAGAGTTCTTGTTGATAAATCACTCGTAAGCATTTCAGATGAAAGTAAAATTGAAATGCATGGTATGTTGAAAGAGCTAGGAAGAAAGATTGTTCAAGAAAATTCAAAGAAAGAGGCAAGAAAGTGGAGTAGATTGTGGCTCCATAAATATTGCTACGATGTTATGTCAGAGAATATGGAAAAGAATGTTGAAGCCATAGTTTTGGAAGGAGATACAGAAATATTGATGGCAGAGGCATTGTCGAATATGAGTCGTCTTAGATTACTCATACTCAAGGATGATGTTAAGGTTTTAGGAAGCCTCACCAATCTTTCTAATCAATTGAGATATGTTGAATGGAATGTCTATCCTTTCATTTATTTTCCATCAAGTTTTCAACCCGACCGACTTGTTGAATTGATCTTGGTGGGTAGCAACATCAAACAACTATGGGAAGGCAAGAAGAATCTGCCCAATTTGAGGATTCTAGATCTAAGCCACTCTAAAAATTTAATTCAGATGTCAGATTTTGGAGAAGCCCCGAATCTTGACCGGTTAAACCTTGAAGGATGTGTAAAGCTCATGCATTTGGATCTATCTATTGATCCTATAAAGCTTGTTTTCTTAAATTTGAAAAACTGCAAAAGTCTTGTATGCATACCTAATGGCATATTTGATCTGAACTCTCTTGAAAATTTAAATATTTGCAGTTGTTCTATGGCGTTTACAAATCCAAGGCTTTCGGAGTTGCCTTCCTTGGCTAGCTTGTCTTGTTTGCGTGAAGTTGATATTAGTTTTTGCAGTCTAAGCCAACTCACTGATACTATTAGATATCTAAGTTGTTTACAAAGATTAAACTTAGGGGGAAACAATTTTGTGACATTGCCTAGCATGAGGGAGCTTTCCAAACTCGTATATTTGAGCTTGGAGCATTGCAAGTTGTTAGAATCTTTGCCTGATCTTCCTTTACATGCTGCCATCGAGCGCAATGAATATTTGAGAGCGGGAATGTATATTTTCAATTGTCCTAAATTACTTGAGAGTGAGCCGGAACGTTGCAGTGACATAACTTTTTCATGGATGAAGCAATTCATACTAGCGAACCAAGAATCATTTGCCTCCTCGCATTGGATTGAATTCGTTATTCCCGGCATTGAAATACCAAGTTGGTTCAATGATCAAAAAATGGCTACATCGATAAGAATAGACCCATCACTCATTATACATAACAATAATGTCATTGGCATTGTTTGTTGTGTATTATTTTCTACGGGACCTAACGATGAACCAAGTAGAACAAAGGAACGAAAAGCCGTATTACATCTAAGTTTTCAAAGAGGTGACTTTGTCGATCACTATCGCATTCAAGTACATACAAATCTTATTATGGTTAGATCAACTCACATGTGGCTAACCTATTTCACTCGTGAATCGTTCTCTAATATTCTAAGAGATATAGGAAATGAAGCCGCTGATGAGATCAGAATGGAAGTTTCCATCGTAGAGGGCGAAGATTTGAATGTGGAGGTGAAGAATTGTGGGTATCTTTGGATATTTTCAGATTAA 2994 0.3631 MASSSNDSTIESRCNNFSSAMNTLPNTNDYDVFVSFRGKDTRHSFTDHLFGALRRKGILAFRDDTALIRGKSIAPELLRAIESSKIYVIVFSENYASSTWCLQELENIIQCEQRSGKGVLPVFYDVDPSVVRLETGYYVEALAEHENYHDPELVQRWRVALAKVANLAGWHMRNMPQYEEIEKIVQEIIRRFGYKFSCLANDLVGTLTPIAELEKCLLLNSISDVRAVGICGMGGVGKTTIASLLYGKISHQFNAGCFIDDVSQFFKYYGPLGVQKQILHQTLGEEHKQIYNHYDGTNLIQSRLRHLKALIVFDNVDQSEQLEKLALYPKVLGEGSRIIIVCRDSHILKEYEVDALYKVQTLNDMNSLQLFCRKAFKLDNIKSVRYKELTHDILNIVDGLPLAIKVLGSFLFDRTISEWRSALIRLKENPNKDIMNALQLSIYGLEKVELQIFLDIACFFDGKEEKYVKNVLNCCGFHPDIGLRVLVDKSLVSISDESKIEMHGMLKELGRKIVQENSKKEARKWSRLWLHKYCYDVMSENMEKNVEAIVLEGDTEILMAEALSNMSRLRLLILKDDVKVLGSLTNLSNQLRYVEWNVYPFIYFPSSFQPDRLVELILVGSNIKQLWEGKKNLPNLRILDLSHSKNLIQMSDFGEAPNLDRLNLEGCVKLMHLDLSIDPIKLVFLNLKNCKSLVCIPNGIFDLNSLENLNICSCSMAFTNPRLSELPSLASLSCLREVDISFCSLSQLTDTIRYLSCLQRLNLGGNNFVTLPSMRELSKLVYLSLEHCKLLESLPDLPLHAAIERNEYLRAGMYIFNCPKLLESEPERCSDITFSWMKQFILANQESFASSHWIEFVIPGIEIPSWFNDQKMATSIRIDPSLIIHNNNVIGIVCCVLFSTGPNDEPSRTKERKAVLHLSFQRGDFVDHYRIQVHTNLIMVRSTHMWLTYFTRESFSNILRDIGNEAADEIRMEVSIVEGEDLNVEVKNCGYLWIFSD* 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2929 997 ProSiteProfiles TIR domain profile. 28 196 IPR000157 GO:0007165
Tpr6g2929 997 CDD Ras_like_GTPase 229 387 - -
Tpr6g2929 997 Pfam C-JID domain 858 993 IPR045344 -
Tpr6g2929 997 Gene3D - 195 356 IPR027417 -
Tpr6g2929 997 Gene3D - 27 194 IPR035897 -
Tpr6g2929 997 SUPERFAMILY "Winged helix" DNA-binding domain 433 537 IPR036390 -
Tpr6g2929 997 Gene3D - 361 446 IPR042197 -
Tpr6g2929 997 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 199 716 - -
Tpr6g2929 997 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 731 959 - -
Tpr6g2929 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 199 716 IPR044974 GO:0006952
Tpr6g2929 997 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 731 959 IPR044974 GO:0006952
Tpr6g2929 997 Pfam NB-ARC domain 218 432 IPR002182 GO:0043531
Tpr6g2929 997 Gene3D Ribonuclease Inhibitor 718 836 IPR032675 -
Tpr6g2929 997 Gene3D Ribonuclease Inhibitor 555 717 IPR032675 -
Tpr6g2929 997 SMART till_3 29 167 IPR000157 GO:0007165
Tpr6g2929 997 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 200 456 IPR027417 -
Tpr6g2929 997 PRINTS Disease resistance protein signature 227 242 - -
Tpr6g2929 997 PRINTS Disease resistance protein signature 303 317 - -
Tpr6g2929 997 PRINTS Disease resistance protein signature 397 411 - -
Tpr6g2929 997 PRINTS Disease resistance protein signature 631 647 - -
Tpr6g2929 997 SUPERFAMILY L domain-like 558 798 - -
Tpr6g2929 997 Pfam TIR domain 30 188 IPR000157 GO:0007165
Tpr6g2929 997 SUPERFAMILY Toll/Interleukin receptor TIR domain 23 170 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2929 Tpr-Chr6 31665690 31669395 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2929 26 796 WRKY Transcription Factor Family AT4G12020 29.611 2.70e-77 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2929 - - cam:101502375 1311.98