Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2926 ATGACTCAGGCTGTGGAAGTATTGAATCGATATGGAACGGATCTGGTTGGAGAAGGGAGGGCTTCGGATTCAGAGTGTTTAGCTGGTTTTGAATGTTTTCTGAATATTGTGAGAGCATTAGGAATGGGATCTTGTATATCAGAGGGTGGTTCTGGTTCGCCGCCTTTGCTAACTTATTCGCAGGAATTGAATGTCGATGGTGGGAAGAGGAGGAGATTAAGGGGTTCCTCTACAATGGATTATAAGGTTCCTGGGAGAATGTTCTTAAATGGGTCAAGTGATATTGCTTCTATGTATTGTAAGCAAGGTAAAAAAGGGATTAACCAAGATGCTATGCTTGTTTGGGAGAACTTTTGTTCAAAGGAAGACACAGTTTTTTGTGGTGTTTTTGATGGTCATGGACCTTATGGCCATAGGGTTGCAAAGAAAGTTAGGGATTCTTTCCCTTTAAAGCTTAGTGCACAATGGGATTTACATCGTAAGAATAAAGATGGATTCAATGAACAAAATGGTGCTGCCACAAGTTATAATTCTGAAGAGCAAATTAGACTGGTTGACGAGAACGATGATCATGAGTTTGATGAAACATATACTATCTCGGCACTAAGAGAATCCTATTTGAAGGCTAGCAAGATTATGGACAAAGAACTGAAACTGCATCGTGATATTGATTGCTTTTGCAGTGGGACTACAGCAGTTACCTTGATCAAGCAGGGGCCGGATCTCGTTGTCGGTAATGTGGGGGATTCAAGAGCTGTGCTGGGAACCCGAGATAGTGACAATTCTCTTATTGCTGTTCAGTTGACCATTGACCTTAAGCCTAATCTTCCAAAGGAAGAAGAGAGGATTAAGCTTCGTAAAGGAAGGGTTTTTTCCTTGAAGAATGAACCGGACGTGGCTAGAGTTTGGCTGCCTAACTCTGATTTCCCAGGTCTGGCTATGGCACGGGCTTTTGGAGATTTTTGCCTGAAGGACGTTGGATTGATTTCTGTTCCAGATGTTTCATATCGCCGCCTTACAGAGAAGGATGAATTTGTTGTGTTAGCAACAGATGGGATTTGGGATGTTTTATCAAATGAAGAAGTTGTGGAGATTGTGGCAGCTGCACCACGGTCTATTGCTGCTCGAGTACTGGTAGAGTCAGCTGTTCGTGCTTGGAGGGCAAAATTTCCTTTCTGTAAGGTTGATGATTGTGCTGCTGTGTGCCTCTTCCTTAATTCAAATACAGAGTTGAAGGCAGAACATACCAAAGACGAGTTGATGCCAGATGCATCAAAGAATCCAGTTGATCAATCATCTCTACCTAGTGAGAATGGAATTGGAGTGGAAGCCGAAAAACAGCCTTAA 1347 0.4254 MTQAVEVLNRYGTDLVGEGRASDSECLAGFECFLNIVRALGMGSCISEGGSGSPPLLTYSQELNVDGGKRRRLRGSSTMDYKVPGRMFLNGSSDIASMYCKQGKKGINQDAMLVWENFCSKEDTVFCGVFDGHGPYGHRVAKKVRDSFPLKLSAQWDLHRKNKDGFNEQNGAATSYNSEEQIRLVDENDDHEFDETYTISALRESYLKASKIMDKELKLHRDIDCFCSGTTAVTLIKQGPDLVVGNVGDSRAVLGTRDSDNSLIAVQLTIDLKPNLPKEEERIKLRKGRVFSLKNEPDVARVWLPNSDFPGLAMARAFGDFCLKDVGLISVPDVSYRRLTEKDEFVVLATDGIWDVLSNEEVVEIVAAAPRSIAARVLVESAVRAWRAKFPFCKVDDCAAVCLFLNSNTELKAEHTKDELMPDASKNPVDQSSLPSENGIGVEAEKQP* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2926 448 Gene3D - 92 414 IPR036457 -
Tpr6g2926 448 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 42 411 - -
Tpr6g2926 448 ProSiteProfiles PPM-type phosphatase domain profile. 95 405 IPR001932 -
Tpr6g2926 448 CDD PP2Cc 95 405 IPR001932 -
Tpr6g2926 448 Pfam Protein phosphatase 2C 121 371 IPR001932 -
Tpr6g2926 448 SUPERFAMILY PP2C-like 95 407 IPR036457 -
Tpr6g2926 448 SMART PP2C_4 85 403 IPR001932 -
Tpr6g2926 448 MobiDBLite consensus disorder prediction 415 448 - -
Tpr6g2926 448 PANTHER ALPHABET, ISOFORM E-RELATED 42 411 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2926 Tpr-Chr6 31624970 31629439 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2926 68 405 PP2C-type Phosphatase Gene Family AT1G16220 61.143 7.51e-148 428
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2926 - - gmx:100802479 725.702