Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2911 ATGAAGAAAACTTTTCATCACTTTAACTTGACACTTTTCACAACTTTCCTGATCTCACTTACATGTTTTGCAAACAACGATGTAACGGTTCAGTTAAACGACGATGTCCTCGGCTTAATGGTATTCAAATCAGACCTATATGACCCTTCATCATATCTCTCATCATGGAATGAAGATGATGTGAATCCATGTTCATGGCAATATGTTAAATGCAATCCACAAACTCAAACAGTTTCTGAACTTTCTTTAGATGGTTTAGGCTTATCAGGTAAAATAGGAAGAGGTCTTGAAAAATTACAACATTTAGTAACACTTTCACTTTCTCATAACAATTTTAGTGGCACTATTAGTCCTTTAGTAACACTTTCAAACACTCTTCAAAAACTTAACCTTAGTCATAACTCATTTTCTGGTCAATTACCTAACTCTTTCATCAACATGACTTCAATGAGATTCATCGATCTATCGTACAATTCATTCTCCGGACAACTGTTCGAATCTTTTTTCGATAATTGTTTCTTCCTTCGTAGCGTTTCGTTCGCTATGAATTCATTTGAAGGACAAATTCCTATGTCATTATTATCTAAATGTTCTTTGTTGAATAGTATTAATCTTTCAAATAATCACTTTAGTGGATATGTTGATTTTTCTAGTGTTTGGTCATTGACTAGGCTTAGAAACTTAGATCTATCAAACAATGCTTTATCTGGTAATTTGGTTAATGGAATTTCAACTTTGCATAATTTGAAAGAGTTAATGTTACAAAATAATCAGTTTTCAGGTTCATTACCAAATGATATTGGATTTTGTCTTCATTTGATTAAGGTTGATTTTAGTACTAATCAGTTTAGTGGTGAATTACCTCAATCATTGGGGAGATTAAACTCTTTAAGCTATTTAAGAGTTTCAAATAATCTCTTATCTGGTGAATTTCCTCAATGGATTGGTAACTTAACAAGTTTGGAACATTTGGACTTATCTAATAATCAATTCTATGGAAACATTCCTTTGTCATTGGTTTCATGCACAATGTTATCTAAGATTTATCTTAGAGGGAATAGTTTCAATGGTACTCTACCTGAGGGATTGTTTGGATTAGGATTAGAGGAAATGGATTTTTCTCATAATCAATTAATAGGTTCAATTCCAGCAGGGTCAAATAGGCTATTAGAAACTCTTACAAAGTTGGATCTTTCAGTTAATCATCTTCAAGGGAATATTCCTGCAGAAATTGGTCTACTTTCGAAGTTGAGATACTTGAATTTGTCTTGGAATGATCTTCATTCTCAGATTCCACCTGAATTTGGTCTACTTCAAAATCTAATGGTTTTGGATCTTCGTAATAGCGCCATGTTTGGTTCGATTCCGGAAGATACATGTGATTCAGGAAATTTGGCTGTTCTTCAACTTGATGGAAATTATTTGAAGGGATCTATTCCAGAAGAGATTGGGAATTGTTCATCTCTTTACTTGTTGAGTTTGTCAAACAATAATTTGACAGGTCCAATTCCAAAATCAATGTCAAAGCTAAATAAGCTCAAAATCCTCAAGTTAGAATTCAATGAGCTTAGTGGAGAACTACCAATGGAGTTAGGAAAGCTTCAAAATCTTCTTGCTGTGAACATATCACATAACAGCCTCACCGGAAGGCTTCCAATGGGTAGCATATTTCAAAACTTAGACAAAAGTTCTTTGGAAGGAAACTATGGTCTTTGTTCACCCTTGCTTCAAGGTCCATGCAAAATGAATGTACCAAAACCTATAGTTCTTGATCCACATGGCTTTGATAACCAAATGAATCCTCAAAGACCGGGAACTGAATCACCCGAGTCTAGTAGTCCAAGTCATCATCACAGGTTCCTTAGTATTTCGGCTATTATAGCAATTGCAGCTTCTTTTCTTATTGTATTAGGAGTTATTGCTATTAGTTTAGTTAATGCTTCTGTAAGGAGAAAGCTCGCATTTGTGGAAAGTGCTTTGGAAAGTATGTGTTCAAGCTCTTCGAGATCAGGAGCACCGGCTACAGGTAAACTCATTCTGTTTGATTCACAATCTTCACAAGATTGGATCAGTAATCCGGAAAACTTGCTCAACAAGGCATCTGAAATTGGTGAAGGAGTTTTCGGAACAGTTTACAAAGTTCCTTTAGGATCACATCAAGGAAGAAATGTTGCAGTCAAGAAGCTTATCACTTCTAACATACTTCAATTTCCGGAAGACTTCGACAGGGAAGTTAGAATTCTAGGTAAAGCTAGACACCAGAATTTGATAGCATTGAAAGGTTACTATTGGACTCCTCAATTACAGCTTTTAGTATCTGAATTTGCACCTAATGGTAACTTGCAATCCAAGTTACACGAAAAGCTTCCTTCAAGTCCTTCACTTTCTTGGCCTAATAGATTCAAGATTTTACTTGGAACAGCAAAGGGACTTGCACATTTGCATCATTCGTTCCGACCACCAATCATTCACTACAACATAAAACCAAGCAACATCTTACTCGATGAAAACTTCAACCCTAAGATATCCGATTTCGGGTTAGCCCGGCTTTTAACAAAGCTAGACAAGCACGTGATGAGTAACAGGTTTCAAAGTGCATTAGGTTATGTAGCGCCCGAATTAGCTTGTCAAAGCTTAAGGGTCAATGAGAAATGTGATGTCTATGGTTTCGGTGTGATGATACTCGAGTTGGTGACAGGTAGAAGACCAGTGGAGTATGGTGAAGATAATGTGTTGATATTGAATGATCATGTAAGGGTTTTGCTTGAACATGGTAATGTTTTGGAGTGTGTTGATCCAAGTTTGATGAATGAATTTCCCGAGGATGAGGTTTTGCCCGTCTTGAAGCTTGCAATGGTGTGTACTTCTCAAATACCATCTAGTAGACCTACTATGGCTGAAGTTGTGCAAATATTGCAGGTCATTAAAACTCCTGTTCCTCAAAGGATGGAAGTGTTTTGA 2961 0.3607 MKKTFHHFNLTLFTTFLISLTCFANNDVTVQLNDDVLGLMVFKSDLYDPSSYLSSWNEDDVNPCSWQYVKCNPQTQTVSELSLDGLGLSGKIGRGLEKLQHLVTLSLSHNNFSGTISPLVTLSNTLQKLNLSHNSFSGQLPNSFINMTSMRFIDLSYNSFSGQLFESFFDNCFFLRSVSFAMNSFEGQIPMSLLSKCSLLNSINLSNNHFSGYVDFSSVWSLTRLRNLDLSNNALSGNLVNGISTLHNLKELMLQNNQFSGSLPNDIGFCLHLIKVDFSTNQFSGELPQSLGRLNSLSYLRVSNNLLSGEFPQWIGNLTSLEHLDLSNNQFYGNIPLSLVSCTMLSKIYLRGNSFNGTLPEGLFGLGLEEMDFSHNQLIGSIPAGSNRLLETLTKLDLSVNHLQGNIPAEIGLLSKLRYLNLSWNDLHSQIPPEFGLLQNLMVLDLRNSAMFGSIPEDTCDSGNLAVLQLDGNYLKGSIPEEIGNCSSLYLLSLSNNNLTGPIPKSMSKLNKLKILKLEFNELSGELPMELGKLQNLLAVNISHNSLTGRLPMGSIFQNLDKSSLEGNYGLCSPLLQGPCKMNVPKPIVLDPHGFDNQMNPQRPGTESPESSSPSHHHRFLSISAIIAIAASFLIVLGVIAISLVNASVRRKLAFVESALESMCSSSSRSGAPATGKLILFDSQSSQDWISNPENLLNKASEIGEGVFGTVYKVPLGSHQGRNVAVKKLITSNILQFPEDFDREVRILGKARHQNLIALKGYYWTPQLQLLVSEFAPNGNLQSKLHEKLPSSPSLSWPNRFKILLGTAKGLAHLHHSFRPPIIHYNIKPSNILLDENFNPKISDFGLARLLTKLDKHVMSNRFQSALGYVAPELACQSLRVNEKCDVYGFGVMILELVTGRRPVEYGEDNVLILNDHVRVLLEHGNVLECVDPSLMNEFPEDEVLPVLKLAMVCTSQIPSSRPTMAEVVQILQVIKTPVPQRMEVF* 987
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2911 986 PANTHER BNAA09G02190D PROTEIN 10 984 - -
Tpr6g2911 986 Gene3D Ribonuclease Inhibitor 33 192 IPR032675 -
Tpr6g2911 986 PRINTS Leucine-rich repeat signature 225 238 - -
Tpr6g2911 986 PRINTS Leucine-rich repeat signature 318 331 - -
Tpr6g2911 986 ProSiteProfiles Protein kinase domain profile. 697 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2911 986 Pfam Leucine rich repeat 464 523 IPR001611 GO:0005515
Tpr6g2911 986 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 984 - -
Tpr6g2911 986 Pfam Leucine Rich Repeat 126 145 IPR001611 GO:0005515
Tpr6g2911 986 Pfam Leucine Rich Repeat 320 341 IPR001611 GO:0005515
Tpr6g2911 986 Pfam Leucine Rich Repeat 416 435 IPR001611 GO:0005515
Tpr6g2911 986 Gene3D Transferase(Phosphotransferase) domain 1 777 983 - -
Tpr6g2911 986 CDD STKc_IRAK 703 973 - -
Tpr6g2911 986 SMART LRR_typ_2 246 270 IPR003591 -
Tpr6g2911 986 SMART LRR_typ_2 414 437 IPR003591 -
Tpr6g2911 986 SMART LRR_typ_2 438 462 IPR003591 -
Tpr6g2911 986 SMART LRR_typ_2 99 124 IPR003591 -
Tpr6g2911 986 SMART LRR_typ_2 318 342 IPR003591 -
Tpr6g2911 986 Gene3D Ribonuclease Inhibitor 193 290 IPR032675 -
Tpr6g2911 986 ProSiteProfiles Leucine-rich repeat profile. 101 123 IPR001611 GO:0005515
Tpr6g2911 986 Pfam Protein kinase domain 699 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2911 986 Gene3D Phosphorylase Kinase; domain 1 680 776 - -
Tpr6g2911 986 ProSitePatterns Protein kinases ATP-binding region signature. 703 728 IPR017441 GO:0005524
Tpr6g2911 986 Gene3D Ribonuclease Inhibitor 293 586 IPR032675 -
Tpr6g2911 986 SUPERFAMILY Protein kinase-like (PK-like) 692 976 IPR011009 -
Tpr6g2911 986 SUPERFAMILY RNI-like 106 549 - -
Tpr6g2911 986 ProSiteProfiles Leucine-rich repeat profile. 416 438 IPR001611 GO:0005515
Tpr6g2911 986 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2911 Tpr-Chr6 31527233 31531411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2911 2 983 Receptor kinase-like Gene Family AT3G28040 61.773 0.0 1203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Tpr6g2911 Pkinase 4.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2911 - - gmx:100813764 1472.22