Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2907 ATGGATTCTTCTGTGTTGACTTCTCACTTCAACAACTTCCGAACCGCCGCAAACTCTTTTCTTTCTCAATACGAACCTCTCACTCTGGTTCTAGTTCCTCTCTTCTCTCTCTTTCTCGCAAACGTGATTCGTTCGTTTTTCAGTGTTATTCATGATAAAGGACTTAAGGCTACTGTACTAGGGTTCTTCATGAGCTTCATCAAATTGATTCCTGGTGTGAAGAGTTATATAGATGCTGAAAAACAGAAGGTTGTGGATAAGTTACAGTCTGATGGTAAATCTAAAAGAGATGGTTGGAAGACAGAGTTGCCAAGCACAGGGTTGGGGACATCTGTCCTTGAGAAAATGAGTGAGGAGAAAAGAAAAGATGCAGTTTGGCAAGGCAAATGCTCTGGTACAGTCTACATTGGAGGAAGTGAGTCTAGTGCACATTTTTCTGTCATAAATGAGGCCTGCTCAATGTTTGCACATACCAATCCCTTGCATTTGGATGTATTCCAGAGTGTTGTACGCTTTGAGGCAGAAGTGGTTGCAATGACAGCGGCTCTTCTTGGAAGTAAAGAAAAGACATCTGGAGGACAAATTTGTGGCAATATGACATCAGGTGGGACTGAAAGTATATTATTAGCCGTTAAATCATCTCGCGACTACATGAAATCCAAGAAAGGAATTACAAGACCCGAAATGATAATCCCTGAGTCTGGTCACTCAGCATATGACAAAGCTGCACATTATTTTAACATAAAACTATGGCGTGTTCCGGTTAACAAAAATTTTCAAGCCGATGTGAAAGCAATTCGACGTCATATTAACAAAAATACCGTTTTGATTGTTGGATCTTCTCCTGGGTTTCCTCATGGGATAATAGACCCCATCGAAGAACTTGGTCAACTAGCATCAAGCTTTGGCATTTGTTTTCATGTGGACCTTTGCCTTGGTGGCTTTGTATTACCTTTTGCTCGTGAGCTTGGGTACCACATTCCACCTTATGATTTTTCTGTTAAAGGGGTTACTTCAATATCAGCAGATGTGCATAAATATGGGTTAGCTCCCAAAGGAACAAGTGTAGTTCTATATAGGAACCATGAAATCAGAAAGCATCAATTTGTTGCAGTTACTGAGTGGTCCGGTGGGTTGTATGTATCTCCAACCATAGCTGGAAGCAGACCTGGAAGCCTTATTGCTGGTGCATGGGCAGCAATGATGTCTCTAGGGAAAGCAGGTTACTTGGAAAATACTAAAGCAATTATGGACGGATCAAAAAGACTACAAAAAGGCATAGAGGAGATTCCTGAGTTATTTATCATTGGAAAACCCGATATGACAATCGTGGCTTTTGGATCAAATGTTCTTGATATATTTGAAGTCAATGATATCATGTCATCCAAAGGTTGGCATTTGAATGCATTGCAGAGACCCAACAGCATCCATATCTGTGTGACACTACAACATGTACCAGTAATTGATGACTTTATAAAGGATTTAAAGGAATCTGTGAATACTGTGAAAGAAAATCCAGGTCCAATAAGTGGAGGTCTAGCACCTATATATGGAGCCGCCGGGAAGATGCCAGATAGAGGAATGGTCCAGGAATTGCTGGTCGATTTCATGGATGGCACCTGCTAG 1626 0.4108 MDSSVLTSHFNNFRTAANSFLSQYEPLTLVLVPLFSLFLANVIRSFFSVIHDKGLKATVLGFFMSFIKLIPGVKSYIDAEKQKVVDKLQSDGKSKRDGWKTELPSTGLGTSVLEKMSEEKRKDAVWQGKCSGTVYIGGSESSAHFSVINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGSKEKTSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESGHSAYDKAAHYFNIKLWRVPVNKNFQADVKAIRRHINKNTVLIVGSSPGFPHGIIDPIEELGQLASSFGICFHVDLCLGGFVLPFARELGYHIPPYDFSVKGVTSISADVHKYGLAPKGTSVVLYRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGSLIAGAWAAMMSLGKAGYLENTKAIMDGSKRLQKGIEEIPELFIIGKPDMTIVAFGSNVLDIFEVNDIMSSKGWHLNALQRPNSIHICVTLQHVPVIDDFIKDLKESVNTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVDFMDGTC* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2907 541 PANTHER SPHINGOSINE-1-PHOSPHATE LYASE 1 21 541 - -
Tpr6g2907 541 Gene3D Aspartate Aminotransferase, domain 1 110 504 IPR015422 GO:0003824
Tpr6g2907 541 Gene3D - 101 538 - -
Tpr6g2907 541 PANTHER - 21 541 - -
Tpr6g2907 541 Pfam Pyridoxal-dependent decarboxylase conserved domain 166 446 IPR002129 GO:0016830|GO:0019752|GO:0030170
Tpr6g2907 541 Gene3D - 138 405 IPR015421 GO:0003824
Tpr6g2907 541 SUPERFAMILY PLP-dependent transferases 82 503 IPR015424 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2907 157 501 Calmodulin-binding Proteins AT3G17760 25.137 2.90e-21 95.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2907 K01634 - gmx:100794395 961.444