Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2896 ATGGAGTCCAAAAATGAAACATCGAGCGTAATTTTAAAATTGATGGGAATTGATAAAGTTCCTTCCCAACATCATCCTGTTAGAAATAGACCGAAAGTGTTATCCGAGGATTACCTGCAGAAAGTTGCTTCTATTGGTCTTAGAAAGAAGCGTTCGTCTCATCAGCGTCACTCTTTTGGAATGAGAACCAGTGAAAAGGAATCCAATGATGTTTCGAAAGTAGTTAAAGCAATAAATAGAGACAAGAACCATAACCCGTCAAAGGTGGAAGGTATGCCACAGAAAACAAATAACGAGTCACAAATTGTTGTGCATCGAGAAGCAGGATTGTATGAAATATTGAGGCCTTCAAAATCTCACTTGGATCCCAAGGAGGTAACTTTCAACTCAAGAATTGTAGTTTCGAAAGTGAATCGTGGAAAGGAAGGAAATGGTGAGTTTAAAAGGAACATTAGATGTAAGGTTGGTTTCGGTTATAGCTTTGCCAGAAAAGTGCCAACAACAAAACCTTTCTCTGATAATTGTGGAACTGTGACTAAGGATGACTTGTTTCAGAAATATTGGGGTTTGAGTAAGAATGCATCTGAAAATGTGACAAACCAAAATTCAAAGAATCGAAATATCAATCAGAAGGCTAGCAGTGAGAAATTGCCATCTTTTTCCTCATATTCCGATAGTAATGATAGTAACGATACCGAGAATTGTACTGACCTGCATAAATTGAAGAAGAGATGTTACAGGAATGATTTGATTGAAAAGGAACATACGCTTTCTCAATTGTCAAGCTCTGACATTCAGATCTTGCAGCAGACATGCTTAATGAATGAAGACGTGAAGAACGATAAGCATGAAGACAGTAGCATGTCTAATAATGTTGCCAGGTCTCTTGATTCATCAATTAATATCTTGGTGTCTGAATCGAAGATTAAGGTTGTTTGTTGCTACAATAATAATCCAACAATGGTGCAATCTGAATCAACGGTATCTGTAATAATGTGCGGGGACAGTGATTCTTCAAGCTATGCTTCAAAGCAACAGGAGACGCCGGAAATTCGAGAAAATTCTGTTTATTCACTTTGCACCGAGGCTGACACAGATTCACTTGGGACCTTTCAGGGGGCATATGAAACAAGTCCAATTTTAGTTTTGGATTCCACATTTGACGAAGACATTTCAGTAATCTCCGAATGCGGTGGTGCTGATGTATATGATTCCTCGGAAGTGGATGACGAAGGACTTGATTTGAATGTTTCAAGTGATGAAGATTGTGAGCAAGAACCAGTACTTGATTTTGACGAGAAGAAAGATATAGTAGGGTTTTCTAGAACAGAAGAAAGTAGGGACTTCTCGTATGTTGTCGAGGTCTTAACCGAGGCAGGTATATCTAACACGAGCTTGTTCAAAGATTTTTCCACATGGCATTCTGCAGAATGTCCTATTAGCCCCTCTGTCTTCGAAACCCTAGAAAAGAAATTCGGCGAGCAGCAATTTTGGAAAAGATCCGAAAGACGGCTTCTCTTTGATCGTATTAATTTTGGGCTGTTAGATATTCTCCATCCTTCTTTATTTATTCCATTGTCGGAAAAGCCTGTGTCGAGAAGAATGAATGTTGAACCAAGCCAGAACATGATTGAGGATGAGCTGTGGGGGTTGCTTGTTTCACAAGAAAAGAAAGCCGGTAAGGAGTCAGTGGACAATATGCTTGGAGGGGAAATTAGGTGGATAGAGCTAAGTGGAGATGTTGAAGATATCGTTAGAGAGATAGTTAAGTTGTTAATAAAGGAGCTCGTAGATGATATGGTTAGTTAG 1809 0.3908 MESKNETSSVILKLMGIDKVPSQHHPVRNRPKVLSEDYLQKVASIGLRKKRSSHQRHSFGMRTSEKESNDVSKVVKAINRDKNHNPSKVEGMPQKTNNESQIVVHREAGLYEILRPSKSHLDPKEVTFNSRIVVSKVNRGKEGNGEFKRNIRCKVGFGYSFARKVPTTKPFSDNCGTVTKDDLFQKYWGLSKNASENVTNQNSKNRNINQKASSEKLPSFSSYSDSNDSNDTENCTDLHKLKKRCYRNDLIEKEHTLSQLSSSDIQILQQTCLMNEDVKNDKHEDSSMSNNVARSLDSSINILVSESKIKVVCCYNNNPTMVQSESTVSVIMCGDSDSSSYASKQQETPEIRENSVYSLCTEADTDSLGTFQGAYETSPILVLDSTFDEDISVISECGGADVYDSSEVDDEGLDLNVSSDEDCEQEPVLDFDEKKDIVGFSRTEESRDFSYVVEVLTEAGISNTSLFKDFSTWHSAECPISPSVFETLEKKFGEQQFWKRSERRLLFDRINFGLLDILHPSLFIPLSEKPVSRRMNVEPSQNMIEDELWGLLVSQEKKAGKESVDNMLGGEIRWIELSGDVEDIVREIVKLLIKELVDDMVS* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2896 602 PANTHER DUF4378 DOMAIN PROTEIN 105 602 - -
Tpr6g2896 602 PANTHER DUF4378 DOMAIN PROTEIN 1 102 - -
Tpr6g2896 602 MobiDBLite consensus disorder prediction 48 71 - -
Tpr6g2896 602 MobiDBLite consensus disorder prediction 195 233 - -
Tpr6g2896 602 Pfam Domain of unknown function (DUF4378) 448 599 IPR025486 -
Tpr6g2896 602 MobiDBLite consensus disorder prediction 195 231 - -
Tpr6g2896 602 PANTHER AFADIN 1 102 - -
Tpr6g2896 602 PANTHER AFADIN 105 602 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2896 Tpr-Chr6 31377329 31382098 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2896 360 602 TRM (TON1 Recruiting Motif) Superfamily AT2G39435 31.298 4.17e-28 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2896 - - cam:101499857 743.421