Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2894 ATGCGCATGGAGATAACAACCTTCGCATCGCACAGTTACTCCGACCTTCCCTCCGCCGCATCCATGCCGACGACTTCCTCTTCTTCCACTCGTCCTATCAGAGTTATTCCTATGCAACACCCGAACACCAATCCTACTTCTTCTTCGTTGCCGCCGAATGTCGCGATTTCACAGTGGGCTTCAAAAGTTCGTGGAATGACTTGGCTTCAATGGCTCGAGTTTTTTCTCCCTTGTTTTCGTTGGATTCGTATCTATAAATGGCGCGAGTATTTTCAGGTCGATCTAATGGCCGGAATTACCGTCGGTGTTATGCTTGTTCCTCAGTCGATGTCATATGCAAAATTAGCTGGACTTCAACCAATATATGGACTCTACTCTGGTTTTGTGCCCATATTTATGTATGCCATATTTGGGTCTTCTCGCCAGCTTGCAGTCGGCCCGGTAGCATTGGTTTCTCTATTGGTCTCTAATGTTCTAGGCAGCGTAGCTGATACATCCAGTGAATTATACACAGAGTTGGCAATTTTACTGGCCCTTATGGTTGGGATACTGGAGTGCATAATGGGACTATTGAGGCTTGGGTGGCTGATCCGTTTCATTAGCCATTCTGTAATCTCTGGCTTTACAACTGCTTCAGCTATTGTGATTGGTTTATCTCAAGCAAAGTACTTTTTGGGGTATGAGATAGACAGAAGTAGCAAGATTATACCGTTAGTTAAAAGTATAATAGCTGGAGCTGATAAGTTTCAATGGCCCCCTTTTGTCCTGGGATCAGTTATGCTTGCAATACTTCTTGTCATGAAACACCTGGGAAAATCAAGGAAATACTTGCGATTCTTGAGAGCTGCAGGTCCTCTTACAGCAGTAGTTCTGGGAACACTCTTTGTAAAAATATTTCATCCGCCATCAATTTCTTTGGTGGGAGAGATACCTCAGGGCCTCCCCAAATTTTCTGTTCCAAGAGCTTTTGAGTACGCAGAGTCCTTAATTCCAACTGCTTTTCTTATAACAGGCGTGGCTATACTGGAGTCAGTAGGAATCGCAAAGGCGTTAGCAGCAAAGAATGGGTATGAGTTGGATTCAAATCAAGAGTTGTTCGGTCTTGGTGTTTCCAATGTTCTTGGTTCATTCTTTTCAGCATACCCTACTACAGGATCCTTTTCAAGATCAGCTGTTAATCATGAAAGTGGTGCGAAATCTGGAGTATCTGGGATAGTTTCAGGGATCATAATAACTTGTGCACTTTTGTTTCTGACGCCATTATTTGAGAGCATACCTCAGTCTGCGCTTGCTGCCATCGTAATCTCTGCTGTGATTGGTCTGGTAGATTATGATGAGGCCATTTTTTTGTGGCGCGTAGATAAAAAAGATTTTCTTCTTTGGACCATTACTAGCAGTATGACATTGTTCCTTGGTATTGAGATTGGTGTACTTGTTGGGGTTGGAGCTTCACTTGCTTTTGTAATTCACGAGTCAGCAAATCCTCACGTTGCTGTTTTGGGTCGTTTGCCAGGGACAACTGTGTATAGAAATGTTAAACAATATCCTGAAGCATATACATACAATGGAATTGTAATTGTTCGTATCGATGCTCCTATTTATTTTGCAAATATTAGTTACATAAAGGACAGGTTGCGGGAATATGAAGTTGTTGTTGATAGTTATACAAGACGTGGTCCCGAGGTTGAAAGAATCAATTTTGTGATTATAGAGATGGCACCTGTGACCTACATAGACTCTAGTGCTGTTCAGGCTTTGAAAGACTTGTATCAGGAGTACAAGTTACGCGACATTCAGATTGCAATATCCAATCCAAACCCAGATATTCTGCTTACGTTGTCTAAATCCGGTCTGGTGGAGTTGATAGGGAAAGAGTGGTACTTTGTGAGAGTACACGATGCTGTTCAAGTTTGCTTGCAGCATGTTCAAAGCTTGAAACCAGGATATGAAAGTTCACAATCATCACGCTCTTCTACATCAGACGAAAAACCAAGCTTCTTGTCACAACTATTTAAACCCAGAGAGGAAAGTCGTACACCTACCGACTTAGAGTCTGGTAATGGAAGGCCTCCACTCGCCCCAATCAGAGATTCTCAATCAGAGCCATTGTTGTCAAAAGAACATTGA 2127 0.426 MRMEITTFASHSYSDLPSAASMPTTSSSSTRPIRVIPMQHPNTNPTSSSLPPNVAISQWASKVRGMTWLQWLEFFLPCFRWIRIYKWREYFQVDLMAGITVGVMLVPQSMSYAKLAGLQPIYGLYSGFVPIFMYAIFGSSRQLAVGPVALVSLLVSNVLGSVADTSSELYTELAILLALMVGILECIMGLLRLGWLIRFISHSVISGFTTASAIVIGLSQAKYFLGYEIDRSSKIIPLVKSIIAGADKFQWPPFVLGSVMLAILLVMKHLGKSRKYLRFLRAAGPLTAVVLGTLFVKIFHPPSISLVGEIPQGLPKFSVPRAFEYAESLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVSNVLGSFFSAYPTTGSFSRSAVNHESGAKSGVSGIVSGIIITCALLFLTPLFESIPQSALAAIVISAVIGLVDYDEAIFLWRVDKKDFLLWTITSSMTLFLGIEIGVLVGVGASLAFVIHESANPHVAVLGRLPGTTVYRNVKQYPEAYTYNGIVIVRIDAPIYFANISYIKDRLREYEVVVDSYTRRGPEVERINFVIIEMAPVTYIDSSAVQALKDLYQEYKLRDIQIAISNPNPDILLTLSKSGLVELIGKEWYFVRVHDAVQVCLQHVQSLKPGYESSQSSRSSTSDEKPSFLSQLFKPREESRTPTDLESGNGRPPLAPIRDSQSEPLLSKEH* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2894 708 Pfam STAS domain 515 634 IPR002645 -
Tpr6g2894 708 ProSitePatterns SLC26A transporters signature. 120 141 IPR018045 GO:0008271|GO:0008272
Tpr6g2894 708 Pfam Sulfate permease family 91 464 IPR011547 GO:0016021
Tpr6g2894 708 MobiDBLite consensus disorder prediction 648 666 - -
Tpr6g2894 708 CDD STAS_SulP_like_sulfate_transporter 515 631 - -
Tpr6g2894 708 SUPERFAMILY SpoIIaa-like 516 638 IPR036513 -
Tpr6g2894 708 PANTHER SULFATE TRANSPORTER 4.1-RELATED 42 672 - -
Tpr6g2894 708 MobiDBLite consensus disorder prediction 648 708 - -
Tpr6g2894 708 ProSiteProfiles STAS domain profile. 514 638 IPR002645 -
Tpr6g2894 708 PANTHER SULFATE TRANSPORTER 42 672 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr6g2894 708 TIGRFAM sulP: sulfate permease 77 634 IPR001902 GO:0015301|GO:0016020|GO:0055085
Tpr6g2894 708 Gene3D STAS domain 494 642 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2894 Tpr-Chr6 31346710 31355976 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2894 30 644 Inorganic Solute Cotransporters AT5G13550 77.796 0.0 989
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2894 K18059 - gmx:100794754 1132.47