Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2890 ATGGTGGGTAACGACGATGCTCGAGCTCCATGCCACCTTTCAAATTCCCGAAAAATGTTTTGGCGCTCTGCTTCGTGGTCTTCCGCTCGTACATCCGCCGCAAACCCTTCCGGAGAATCGGAATCGAATTTCTCAGATCCCAATTCCGGTGTTGAGAATACCAACCGGAGATTCCCTCCGCCGCCGTTGACGCCTAGGTCGCAGCAAAATTGTAAGGCACGGTCGTCGTGTTTGCCGCCTCTTCAGCCTCTTTCGATTGCTCGCCGGAGTTTGGATGAGTGGCCGAAAGCGAGTTCCGACGATATCGGGGAGTGGCCACAACCACCTATTACTCCTGGTGGGAGAGGTAATGGTAGTAGCAATAGTAATAGTACTAATAACAATGGTGAAAGATTGAAACTTGATTTGTCTACAATTCAGCAGAATAATAATCCTGATAGTAGGAATAATGGTGGACTTGTGAAGAGAGATAAGATTGCTTTTTTCGATAAGGAATGTTCTAAAGTTGCTGAACATGTTTATCTTGGTGGTGATGCTGTTGCTAAAGATAGGGAAATTTTGAAAAGAAATGGGATTACTCATGTTTTGAATTGTGTAGGTTTTGTGTGTCCTGAGTATTTCAAAGCTGATTTTGTGTATAGGACTTTGTGGCTACAAGATAGTCCTAGTGAGGATATTACTAGTATTTTGTATGATGTATTTGATTATTTTGAGGATGTTAGGGAAAAGAATGGGAGGGTGTTTGTTCATTGTTGTCAAGGGGTGTCCAGGTCGACGTCTCTTGTTATTGCTTACCTTATGTGGAGGGAAGGACAGAGTTTCGATGATGCTTTTCAGTTTGTGAAGGCGGCGAGAGGTATTGCTGATCCGAATATGGGGTTTGCTTGTCAGTTATTGCAGTGTCAGAAAAGGGTTCATGCATTCCCTCTTAGTCCTAGCTCTTTGTTGAGAATGTATAGGATTGCTCCTCACTCGCCGTATGATCCTTTGCATCTTGTTCCGAAGATGTTGACAGATCCGTCTTCGTCTGCTTTGGACTCTAGGGGTGCATTTATTGTGCATATTCCTTCGGCGATATATGTTTGGATAGGTAAGAAATGTGAAGCTATCATGGAAAGGGATGCTAGAGGGGCTGCGGGTCAGATTGTCCGGTATGAGAGAGTGCAAGGATCGGTTATCATGATTAAGGAAGGTGATGAACCACCATATTTTTGGGATGCTTTTTCGAAGTTTTTGCCTTTGATGGACATGAGTGGTGGCAGTAAAGAAGAAAGTAGCAAACCATGTCTTAAGTATTTTCCTGGTGACAGGAAAGTTGATGCATATGATGTGGATTTTGAAGTTTTTGGAAAAGCCATTGTGGGAGGTTTTGTGCCTCCATTTGCATCATCAGAGAATGAACATGAAACACATCTTCCTGCAAGAGAGAGTAGTTGGAGTGTTTTAAGGCGGAAAGGTTCCTCTCCTAATGTGAAGGAATTTGTCTCAGCCCCTAAGTTATCCCTCCCACGGGTTTATTCAGATTCCATGTTGTGTATTCATACATCACAAATTCAACAATTTCCATCACCCTCAATGTCGTCAACATCATCAACTTTATCATCATCCTCTTCACCCCCTTTTGTCTCTCCAGATTCTGTTTCTTCTGATTCCAGCACTCACTCAAAGTTTTTGTTAGATTTGTCCCCAGATTCCTCCACTCTAGTTTCTCCAGTATCTTCATCTTTGTCTAGCTTTTCTAATTTGTCCCTCTCGTCAAATTCTACTTCTCAACCAACGTCTAAGTGTACAGATATTGATGGCGTCAAGTTATCACATCCATGTTCTCAGGCTGCCTCCTTATCATTGAAAAAACCATCAACTTCCATTGCTGAACGCAGAGGTAGTTTATCCAAGTCTTTGAAGTTGCCACCCCTAATGAATAATAACACAAAAACAATAGATAAACCATCAACTATTCGTTCCAGTCGGGAACATGGTGTTCTTGCTAACAACAACTTTAGCTGTGTGCAAGATTCAGACAGTATAGATTATTTGTTTGATTCTACCAACCATGTCAAAGGTGAAGGTACGAATTGTGAGCTGGCATCACGTCCAGGCATTGTTGATAGCGCAGGCTGCAAGGAATCACCACTTCTCAGGAACTGTGTTGAGCCTTTGGGACATAGTTTCTCAAGAGAAGATTTGAACTTTACCTCATCAAGGGGAGCTAATGAGAGTGGCTCGTTACAGTGTAGTAAGACACGAACTTTAGTATATCGCTGGCCCAGTCTAGAAAAGATTGAGACTTTTGGTGCAAATCATTTGGGCTCGGAGGCTGCTTTTGTCATATTCTCTCCAAGCATGCATATGCATACAGGAAACATTTTGTATATTTGGGTAGGGAGTTCTTTCAAACTGGATACTTCACAGGCTCAGTTAGATAGTGATAGACAGTCTGATTTTCTTGGAGCAGTTGACTGGAACCAAATTGGTTGTGATCTCCTTGCTCAGTTTGATTTGCCGAAGAATACAGTCACTAAGATTGTTAAAGAGAATGAAGAACCGCAAGAGTTCCTTGCTTTGCTGAGTTCATTGTAG 2580 0.4244 MVGNDDARAPCHLSNSRKMFWRSASWSSARTSAANPSGESESNFSDPNSGVENTNRRFPPPPLTPRSQQNCKARSSCLPPLQPLSIARRSLDEWPKASSDDIGEWPQPPITPGGRGNGSSNSNSTNNNGERLKLDLSTIQQNNNPDSRNNGGLVKRDKIAFFDKECSKVAEHVYLGGDAVAKDREILKRNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVFDYFEDVREKNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQFVKAARGIADPNMGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLTDPSSSALDSRGAFIVHIPSAIYVWIGKKCEAIMERDARGAAGQIVRYERVQGSVIMIKEGDEPPYFWDAFSKFLPLMDMSGGSKEESSKPCLKYFPGDRKVDAYDVDFEVFGKAIVGGFVPPFASSENEHETHLPARESSWSVLRRKGSSPNVKEFVSAPKLSLPRVYSDSMLCIHTSQIQQFPSPSMSSTSSTLSSSSSPPFVSPDSVSSDSSTHSKFLLDLSPDSSTLVSPVSSSLSSFSNLSLSSNSTSQPTSKCTDIDGVKLSHPCSQAASLSLKKPSTSIAERRGSLSKSLKLPPLMNNNTKTIDKPSTIRSSREHGVLANNNFSCVQDSDSIDYLFDSTNHVKGEGTNCELASRPGIVDSAGCKESPLLRNCVEPLGHSFSREDLNFTSSRGANESGSLQCSKTRTLVYRWPSLEKIETFGANHLGSEAAFVIFSPSMHMHTGNILYIWVGSSFKLDTSQAQLDSDRQSDFLGAVDWNQIGCDLLAQFDLPKNTVTKIVKENEEPQEFLALLSSL* 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2890 859 MobiDBLite consensus disorder prediction 23 78 - -
Tpr6g2890 859 ProSiteProfiles Dual specificity protein phosphatase domain profile. 165 307 IPR020422 GO:0006470|GO:0008138
Tpr6g2890 859 Pfam Dual specificity phosphatase, catalytic domain 173 303 IPR000340 GO:0008138|GO:0016311
Tpr6g2890 859 SMART VILL_6 314 411 IPR007122 GO:0051015
Tpr6g2890 859 SMART dsp_5 165 304 IPR020422 GO:0006470|GO:0008138
Tpr6g2890 859 Gene3D Protein tyrosine phosphatase superfamily 139 307 IPR029021 -
Tpr6g2890 859 MobiDBLite consensus disorder prediction 92 126 - -
Tpr6g2890 859 ProSitePatterns Tyrosine specific protein phosphatases active site. 249 259 IPR016130 GO:0016311|GO:0016791
Tpr6g2890 859 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 160 306 IPR029021 -
Tpr6g2890 859 MobiDBLite consensus disorder prediction 523 546 - -
Tpr6g2890 859 MobiDBLite consensus disorder prediction 23 55 - -
Tpr6g2890 859 Gene3D Severin 316 412 IPR029006 -
Tpr6g2890 859 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 224 285 IPR000387 GO:0016311|GO:0016791
Tpr6g2890 859 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 1 853 - -
Tpr6g2890 859 CDD DSP 166 300 - -
Tpr6g2890 859 SUPERFAMILY Actin depolymerizing proteins 312 416 - -
Tpr6g2890 859 PANTHER MKPA PROTEIN 1 853 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2890 Tpr-Chr6 31305754 31311659 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2890 1 201 Protein tyrosine phosphatase (PTP) family AT3G55270 59.024 3.24e-64 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2890 - - mtr:MTR_7g023250 1318.91