Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2881 ATGTCTTATCAGAATAAAGGCTTTTGGATGCCCCAGGATGCTAGTTGCTTAGCTGAAGAAAATATTAGCTATGAGAAATCTTCAAGAGTCGAACAAAAGCGAAGTCATCAATGGTTTATGGATACTGGTGAACCAGGAATATTCAACAACAAGAAACAAGCAGTTGAAGCTGTTAGTGACAGACCAGTTTCAGCAGTGAATGTTTCGCAATGGGACACGGGTTCGGGATTTCACTCACTGACAGGACAATTTTCTGATCGTCTCTTTGGATCTGATCTTATACGGTCTGTTAATTCAGTCGATAAAAGCATACCGTCAGTTGGAAGTGGAAATCCGAACATGGGAATAAAGGATTTTGGTGATCAGTATGGTATTGATCCATCTGTCGGACTGTCAATATCTTCTTCATGTCTGAATTTTGGCGGTATCAGGAAAGTTAAAGTTAATCAAGTCAGAGATTCTGACCATGGCATGCCAGCTGCATCCATAGGGAACTCTTGTAGTCTGTCTGATAACAATACATTTTCAATTGGTTCAGATTACAATAAGATTGATGGAAATATTACATCGGGCCTAACTTATAACAATGGAAATGACAACACCATTGCTTTAGGTATAAGCAAGCCCGATGAAAATCTCTTTTCAACCGGTCACATCTTCCATAAAGGGGATAGGAGTTTTTTATTGATGGGTCACAATTATGGTAAGGTAGATGAAAGTGCCTTATCAATTGATCGGCCGTCTGATAGGGGAGATGGAAATTTCGTAACAATGGGTCAGACATATGGAAAGGACGATGGCAATTTGATATCTCTGGGAACGACATATTCCAAGGCGTATGCGAGCATAACATCAATTGGTCCAACCTATGGTAAATCAGGAGAAACTTTCACAACTGCTCCATCGTTCGACGCCGGAAACTCTAGCTCTTTTGTAGGTTTTCATGTTGACCCTGAACCGATTCCCTCTGTTGGAATCATTAATAGTTCCAATCCATTAATAAGCAAACAGAACTTGGCTCAAGGTGTAGATAGCCAGAAGGATCTGACTGAATCAAACCCTGATCCGCGTGTAAATATCACTCAAAAACATAATGCTAAAAATGATACTGTTGTTAAGAACAAAGAGCCAAATTCGACTAAGAAGACTTCAAACAATTTTCCTGTAAATGTCAAAAGTTTATTGTCAACTGGTATTTTTGATGGCATTCCGATAAAATATTGTACATGGTCAAGGGAGCAGAAATATCTTCAAGGAGTCATAAAAGGAACCGGTTACTTGTGTTCATGTGATGTCTGCAAGGGGCAAAAGGCGCTTAATGCATATGAATTTGAGCGTCATGCCGGGGCCAAGTCAAAACACCCTAACAATCACATTTTCTTTGAGAATGGAAAATCAATATATGGTGTTGTTCAAGAGCTGAAAAACAGTCCTCAGGAGATGCTTTTTGATGCAATTCAAACTGTAACTGGCTCCACCATCAATTTAAGGAACTTTCGTATTTGGAAAGCATCGTACCAAGCTGCTACTCGTGAGCTTCAGCGCATCTATGGAAAGGATGATGACTCAGCCATACCGTCTTAA 1584 0.399 MSYQNKGFWMPQDASCLAEENISYEKSSRVEQKRSHQWFMDTGEPGIFNNKKQAVEAVSDRPVSAVNVSQWDTGSGFHSLTGQFSDRLFGSDLIRSVNSVDKSIPSVGSGNPNMGIKDFGDQYGIDPSVGLSISSSCLNFGGIRKVKVNQVRDSDHGMPAASIGNSCSLSDNNTFSIGSDYNKIDGNITSGLTYNNGNDNTIALGISKPDENLFSTGHIFHKGDRSFLLMGHNYGKVDESALSIDRPSDRGDGNFVTMGQTYGKDDGNLISLGTTYSKAYASITSIGPTYGKSGETFTTAPSFDAGNSSSFVGFHVDPEPIPSVGIINSSNPLISKQNLAQGVDSQKDLTESNPDPRVNITQKHNAKNDTVVKNKEPNSTKKTSNNFPVNVKSLLSTGIFDGIPIKYCTWSREQKYLQGVIKGTGYLCSCDVCKGQKALNAYEFERHAGAKSKHPNNHIFFENGKSIYGVVQELKNSPQEMLFDAIQTVTGSTINLRNFRIWKASYQAATRELQRIYGKDDDSAIPS* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2881 527 PANTHER AUTOIMMUNE REGULATOR 306 521 - -
Tpr6g2881 527 PANTHER AUTOIMMUNE REGULATOR 1 305 - -
Tpr6g2881 527 Pfam Tify domain binding domain 419 474 IPR032308 -
Tpr6g2881 527 PANTHER N-LYSINE METHYLTRANSFERASE 1 305 - -
Tpr6g2881 527 PANTHER N-LYSINE METHYLTRANSFERASE 306 521 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2881 Tpr-Chr6 31233595 31238114 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2881 381 507 PHD Transcription Factor Family AT3G53680 51.181 2.39e-35 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2881 - - gmx:100782217 725.317