Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tpr6g2858 | ATGGCAATAGACCATACAAGAATCACTATCCGTGCATTCAAAGAAAGTGACATTGAAGATGTGTTGTTATGGTTAGGTGATAATAGAGTTCTTCAAAATACTCGAATGGAGGCATGTAATTCAAAAGAAGAGGCATTAGATTTCATAAAAACTAAATGCATTTACCCATTACAACAATCAATATGTCTTGATGACCACTCCATTGGAATTATTTATGTCCTTCCTTATGATAATGATCAGAAGCATAAAGCAGATTTAGGTTATGCAATTGGATTTAATTATTGGGGTCAAGGTATAGTCACCAAAGCATTGAGGATTCATTTGTGTAAAGTGTTTCAAGAGTTCCCTTATTTGCATAGGTTGCAAGCTCATACTCTTGTGGAAAATAAGGCTTCTCAAAGGGTGTTAGAAAAAGTTGGCTTCATTAGGGAAGGATTGCTTAGAAAGGTTTTTTTACACAAAGGTAATATTGAGGATTTCTATATTTTTAGTTTCTTGTCTAGTGATGAAATTCTTCATGCTTTATTTGAGTCCATATATCAACATTTTGTAGTCATGGAAATAGAGCACACAAGAATCACTATTCGTCCATTCAAAGAAAGTGACATGGAAGATGTGTTGTTATGGTTAGGTGATAATAGAGTTCTTCAAAATACCCGAATGGAGATGTGTAATTCAAAAGAAGAGGCATTAGATTTCATAAAAACTAAATGCATTTACCCATTACAACAATCAATATGTCTTGATGACCACTCCATTGGAATTATTTGTGTCCGTCCTTATGATAATGAGAAGCATAAAGCTGATTTGGGTTATGCCATTGGATTTAATTATTGGGGTCAAGGTATAGTCACCAAAGCATTGAAGATTCTTTTGTGTAAAGTGTTTCAAGAATTTCCTCATTTGCATAGGTTGGAAGCTTATACTCTTGTGGAGAATAAGGCTTCTCAAAGGGTGTTGGAAAAAGTTGGCTTCCATAGAGAAGGATTGCTTAGAAAGGCTTTTTGTCACAAAGGGAATATTGAGGATTTCTATATTTTTAGTTTCTTGTCCACGGATGAAATCCTTCATGCTATTTGA | 1080 | 0.3426 | MAIDHTRITIRAFKESDIEDVLLWLGDNRVLQNTRMEACNSKEEALDFIKTKCIYPLQQSICLDDHSIGIIYVLPYDNDQKHKADLGYAIGFNYWGQGIVTKALRIHLCKVFQEFPYLHRLQAHTLVENKASQRVLEKVGFIREGLLRKVFLHKGNIEDFYIFSFLSSDEILHALFESIYQHFVVMEIEHTRITIRPFKESDMEDVLLWLGDNRVLQNTRMEMCNSKEEALDFIKTKCIYPLQQSICLDDHSIGIICVRPYDNEKHKADLGYAIGFNYWGQGIVTKALKILLCKVFQEFPHLHRLEAYTLVENKASQRVLEKVGFHREGLLRKAFCHKGNIEDFYIFSFLSTDEILHAI* | 360 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tpr6g2858 | 359 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 8 | 167 | IPR000182 | GO:0016407 | |
| Tpr6g2858 | 359 | PANTHER | ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN | 1 | 173 | - | - | |
| Tpr6g2858 | 359 | PANTHER | ACETYLTRANSFERASE (GNAT) DOMAIN PROTEIN | 187 | 356 | - | - | |
| Tpr6g2858 | 359 | Pfam | Acetyltransferase (GNAT) domain | 192 | 326 | IPR000182 | GO:0016407 | |
| Tpr6g2858 | 359 | Pfam | Acetyltransferase (GNAT) domain | 7 | 141 | IPR000182 | GO:0016407 | |
| Tpr6g2858 | 359 | Gene3D | - | 2 | 165 | - | - | |
| Tpr6g2858 | 359 | Gene3D | - | 182 | 349 | - | - | |
| Tpr6g2858 | 359 | PANTHER | ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN | 1 | 173 | - | - | |
| Tpr6g2858 | 359 | PANTHER | ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN | 187 | 356 | - | - | |
| Tpr6g2858 | 359 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 185 | 350 | IPR016181 | - | |
| Tpr6g2858 | 359 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 3 | 166 | IPR016181 | - | |
| Tpr6g2858 | 359 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 193 | 351 | IPR000182 | GO:0016407 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Tpr6g2858 | Tpr-Chr6 | 31019656 | 31024780 | Dispersed/Transposed |
Transcription factors information
| Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
|---|---|---|---|---|---|---|---|
| TR | GNAT | Tpr6g2858 | Acetyltransf_3 | 1.9e-19 | CL0257 |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tpr6g2858 | - | - | gmx:100802886 | 231.491 |