Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2855 ATGAAGTTATGGCCATTCAAAGTAAATAGTGGCCTCGATGACAAACCCATGATTGTCGTCAATTACAATGACGAGGAAAAGCATTTTTCTGCTGAGGAAATTTCATCCATGGTATTGACAAAAATGCGTGAGATTGCAGAAACTTACCTTAGATCAACAGTGAATGATGTTGTTATAACTGTGCCTGCTTACTTCAATAACTCACAAAGACAAGCTACTAGAGATGCAGGTGTTATTGCAGGCCTTAACGTTATGCGAATACTCAATGAGCCTACTGCAGCAGCAATTGCATATGGCCTTGGCAAGAAACCATTTCATTCTGGACCTAGACATGTCTTCATTTTTGATTTAGGCGGTGGTACATTAGATGTATCTGTTCTCACATTTGAGAAAGAAAATATCCATATTAAGGCCATTGGCGGAGACACCCACCTCGGGGGACAAGACTTTGATTATACAATGGTGACCTATTTCATGAAGGAGTTCCTGAGGAAGCATAAGATTGATATTAGTGGAGACCCAAGAGCCCTTAGGAGGTTGAAATCTGCTTGTGAAAAAGCAAAGAGAATACTTTCTTCCAATACTGAGACCACCATTGAGATAGATTGTTTAAAAGATGGTATAGATCTATGCTTACCAATTAGTCGTGCAAGGTTTGAGGAACTCAACAAGAATCACTTCAACAAGTGCATGGAGATTGTAGAAAAGTGTCTAATAGATAGCAAGATGGACAAGAGCAGAATTCATGATGTTGTCCTTGTTGGTGGATCTACAAGGATCGTAAAAGTGCAACAACTACTGAGTGATTTCTTTGAAGGGAAGGAATTATGCAACAGCATCAATGCCGATGAGGTGGTTGCATTTGGCGCCGCTGTCCATGCATCTATGTTGAGTGGGGAAATTAGCGAAAAGGTTCTAGATTTGAAATTGAGGGAGGTCATTCCTTTGTCCCTTGGATTGGAAGTAATTGGAGGAATCATGGAAATAATGATTCCTAGGAATACCATATTTCCTATAGACATGGAAAAAGTATTCACCACACCTTTAGACAACCAAATCAATATTGTCATTAATGTTTATGAGGGTGAGAGGCAAATGATCAGGGACAACAACTTGCTTGGAACATTTGAGTTCAAAATTCCTCCAGTTCCGGCAGGTGTTCCTCATATCAAGATCAACTTTCAAATTAATGATGATGGCATCTTACACGTCTCTACCACGGAAGAAATTCTTGGAGTTAATAAGAAGGTTAAGATAATAAATCACAGGGGAAGGCTATCAAATGAGGAAATTGAGAGAATGATCAAAGAAGCTGAGAAGTACAAGGAAGAGGATAAAAGATATAAGAAGAATGCAGAAGCAAGAAATGCACTGCAGACGTATGCATACAACATGCGAAATGCAATAAATGATGAGGAAATTAGTTTGAAGCTTTCAGCAAAAGAAAAGAAAGAGATAGATGAAAAAATTGATTTGGTTTTACTGTGGCTTGATGTCAATGTGGTTGCAGAACAACATGATTTTGAAAAATTTCATAGACTTGTTTCAAGTGTGTTTAATCCAATTATCATTAAGATGATAAAAGACGATGTGGAGAGTGATGTACAGCACGGTACTGATGTTCAAAATAAAAAGAACGAGGGGAGTAGTGTGCAGCAAGGTACTGATGTTCGAAATAAAAAGAAGCGCCGTTGGATGTTTTTATTAGCAAAATATACTTTGCAGATAGTGTATACAGCTACAACAGGTGACATCACCGGAATAACTTCTTCTATAATTGGTGACTGTTTGAAAAATAGTATAAACAAATAA 1812 0.3791 MKLWPFKVNSGLDDKPMIVVNYNDEEKHFSAEEISSMVLTKMREIAETYLRSTVNDVVITVPAYFNNSQRQATRDAGVIAGLNVMRILNEPTAAAIAYGLGKKPFHSGPRHVFIFDLGGGTLDVSVLTFEKENIHIKAIGGDTHLGGQDFDYTMVTYFMKEFLRKHKIDISGDPRALRRLKSACEKAKRILSSNTETTIEIDCLKDGIDLCLPISRARFEELNKNHFNKCMEIVEKCLIDSKMDKSRIHDVVLVGGSTRIVKVQQLLSDFFEGKELCNSINADEVVAFGAAVHASMLSGEISEKVLDLKLREVIPLSLGLEVIGGIMEIMIPRNTIFPIDMEKVFTTPLDNQINIVINVYEGERQMIRDNNLLGTFEFKIPPVPAGVPHIKINFQINDDGILHVSTTEEILGVNKKVKIINHRGRLSNEEIERMIKEAEKYKEEDKRYKKNAEARNALQTYAYNMRNAINDEEISLKLSAKEKKEIDEKIDLVLLWLDVNVVAEQHDFEKFHRLVSSVFNPIIIKMIKDDVESDVQHGTDVQNKKNEGSSVQQGTDVRNKKKRRWMFLLAKYTLQIVYTATTGDITGITSSIIGDCLKNSINK* 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2855 603 Gene3D - 1 37 - -
Tpr6g2855 603 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 453 527 IPR029048 -
Tpr6g2855 603 PANTHER HEAT SHOCK PROTEIN 70KDA 1 538 IPR013126 GO:0005524|GO:0140662
Tpr6g2855 603 Gene3D - 103 277 - -
Tpr6g2855 603 Coils Coil 424 455 - -
Tpr6g2855 603 ProSitePatterns Heat shock hsp70 proteins family signature 2. 114 127 IPR018181 -
Tpr6g2855 603 PANTHER HEAT SHOCK COGNATE 70 KDA PROTEIN 2-LIKE 1 538 - -
Tpr6g2855 603 SUPERFAMILY Actin-like ATPase domain 109 297 IPR043129 -
Tpr6g2855 603 Gene3D Actin; Chain A, domain 4 146 229 - -
Tpr6g2855 603 Gene3D - 455 528 IPR029048 -
Tpr6g2855 603 PRINTS 70kDa heat shock protein signature 57 77 - -
Tpr6g2855 603 PRINTS 70kDa heat shock protein signature 120 130 - -
Tpr6g2855 603 PRINTS 70kDa heat shock protein signature 248 264 - -
Tpr6g2855 603 PRINTS 70kDa heat shock protein signature 280 300 - -
Tpr6g2855 603 PRINTS 70kDa heat shock protein signature 307 326 - -
Tpr6g2855 603 PRINTS 70kDa heat shock protein signature 387 403 - -
Tpr6g2855 603 Pfam Hsp70 protein 1 520 IPR013126 GO:0005524|GO:0140662
Tpr6g2855 603 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 304 458 IPR029047 -
Tpr6g2855 603 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 302 454 IPR029047 -
Tpr6g2855 603 SUPERFAMILY Actin-like ATPase domain 2 102 IPR043129 -
Tpr6g2855 603 MobiDBLite consensus disorder prediction 535 558 - -
Tpr6g2855 603 Gene3D - 38 294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2855 Tpr-Chr6 31003040 31005964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2855 4 528 Calmodulin-binding Proteins AT3G12580 62.548 0.0 671
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2855 K03283 - gmx:100798636 703.36