Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tpr6g2854 | ATGGAGACGGTTCAAAGTTGTCTTACAGATGCTAAAATCGATAAGAAACTTGTCGATGATGTTGTACTTGTTGGTGGTTCTTCTCGGATTCCAAAAGTACAGCAGCTATTACAAGACTTTTTCAATGGAAAGGATTTGTGTGTGAGCATAAACCCAGATGAGGCTGTGGCGTATGGTGCGGCAGTGCAAGGTGCTTTGTTGGGTAAAGGTATAAAGTCTTTTCCAAACTTAGTGTTGCGAGATGTTACACCACTGTCACTTGGTATATCGTTAAAAGACGATATCATGAGTGTATTGATTCCAAGAAATTCTACCATTCCTGTGAAGACGAAAAAAGTATTCCACACATGTGAAGATGACCAACCTGGTGTCTCAATCGATGTTTACGAGGGTGAGAGAATGATTGCAACTGAGAATAACTTGCTTGGTTTATTTGAACTTGAAATTCCTCTTGCGCCTCGCCACCTTCCTATCAAAGTATGTTTTGCTATAGATGCCGATGGAATATTAACTGTCTCTGCAGAGGAAGAAACTAGTGGCAATAAGAAAGATATTACAATTACGAAAGAAAATGGTAGACTATCAACGGAAGAAATTGAGAGAATGATTCAAGAAGCTGAGAAGTTTAAAGACGAGGATATTAAGTTCCAGAAGAAAGTTAAAGCCATGAATGTTTTGGATGATTACCTCTATAACATGAGAAAAGTTATGAAGGATGGTAGTGTTACTTCCATGCTTAGCTCGACGGATAAAATGAAAATCAATGCTGCAATGATTAAAGGAAAGAATTTGATTGATGACAAAGAGCATCAAGAAACATTTGTGTTTGTCGACTTTTTGAGGGAACTCGAGAGCATCTTTGAATCTGCTTTGAAGAAGAGCAACAGAGGTTACTCTGATGAGGAAAGTGATTCTGAATGA | 921 | 0.3822 | METVQSCLTDAKIDKKLVDDVVLVGGSSRIPKVQQLLQDFFNGKDLCVSINPDEAVAYGAAVQGALLGKGIKSFPNLVLRDVTPLSLGISLKDDIMSVLIPRNSTIPVKTKKVFHTCEDDQPGVSIDVYEGERMIATENNLLGLFELEIPLAPRHLPIKVCFAIDADGILTVSAEEETSGNKKDITITKENGRLSTEEIERMIQEAEKFKDEDIKFQKKVKAMNVLDDYLYNMRKVMKDGSVTSMLSSTDKMKINAAMIKGKNLIDDKEHQETFVFVDFLRELESIFESALKKSNRGYSDEESDSE* | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tpr6g2854 | 306 | Pfam | Hsp70 protein | 2 | 272 | IPR013126 | GO:0005524|GO:0140662 | |
Tpr6g2854 | 306 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 1 | 295 | IPR013126 | GO:0005524|GO:0140662 | |
Tpr6g2854 | 306 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 21 | 35 | IPR018181 | - | |
Tpr6g2854 | 306 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 72 | 222 | IPR029047 | - | |
Tpr6g2854 | 306 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 222 | 294 | IPR029048 | - | |
Tpr6g2854 | 306 | PANTHER | HEAT SHOCK 70 KDA PROTEIN | 1 | 295 | - | - | |
Tpr6g2854 | 306 | Gene3D | - | 223 | 295 | IPR029048 | - | |
Tpr6g2854 | 306 | SUPERFAMILY | Actin-like ATPase domain | 2 | 67 | IPR043129 | - | |
Tpr6g2854 | 306 | Gene3D | - | 1 | 47 | - | - | |
Tpr6g2854 | 306 | Gene3D | - | 48 | 65 | - | - | |
Tpr6g2854 | 306 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 75 | 226 | IPR029047 | - | |
Tpr6g2854 | 306 | PRINTS | 70kDa heat shock protein signature | 18 | 34 | - | - | |
Tpr6g2854 | 306 | PRINTS | 70kDa heat shock protein signature | 50 | 70 | - | - | |
Tpr6g2854 | 306 | PRINTS | 70kDa heat shock protein signature | 76 | 95 | - | - | |
Tpr6g2854 | 306 | PRINTS | 70kDa heat shock protein signature | 155 | 171 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tpr6g2854 | Tpr-Chr6 | 31001849 | 31002899 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tpr6g2854 | 1 | 297 | Calmodulin-binding Proteins | AT3G12580 | 57.333 | 1.83e-108 | 327 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tpr6g2854 | K03283 | - | gmx:102667572 | 320.087 |