Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2854 ATGGAGACGGTTCAAAGTTGTCTTACAGATGCTAAAATCGATAAGAAACTTGTCGATGATGTTGTACTTGTTGGTGGTTCTTCTCGGATTCCAAAAGTACAGCAGCTATTACAAGACTTTTTCAATGGAAAGGATTTGTGTGTGAGCATAAACCCAGATGAGGCTGTGGCGTATGGTGCGGCAGTGCAAGGTGCTTTGTTGGGTAAAGGTATAAAGTCTTTTCCAAACTTAGTGTTGCGAGATGTTACACCACTGTCACTTGGTATATCGTTAAAAGACGATATCATGAGTGTATTGATTCCAAGAAATTCTACCATTCCTGTGAAGACGAAAAAAGTATTCCACACATGTGAAGATGACCAACCTGGTGTCTCAATCGATGTTTACGAGGGTGAGAGAATGATTGCAACTGAGAATAACTTGCTTGGTTTATTTGAACTTGAAATTCCTCTTGCGCCTCGCCACCTTCCTATCAAAGTATGTTTTGCTATAGATGCCGATGGAATATTAACTGTCTCTGCAGAGGAAGAAACTAGTGGCAATAAGAAAGATATTACAATTACGAAAGAAAATGGTAGACTATCAACGGAAGAAATTGAGAGAATGATTCAAGAAGCTGAGAAGTTTAAAGACGAGGATATTAAGTTCCAGAAGAAAGTTAAAGCCATGAATGTTTTGGATGATTACCTCTATAACATGAGAAAAGTTATGAAGGATGGTAGTGTTACTTCCATGCTTAGCTCGACGGATAAAATGAAAATCAATGCTGCAATGATTAAAGGAAAGAATTTGATTGATGACAAAGAGCATCAAGAAACATTTGTGTTTGTCGACTTTTTGAGGGAACTCGAGAGCATCTTTGAATCTGCTTTGAAGAAGAGCAACAGAGGTTACTCTGATGAGGAAAGTGATTCTGAATGA 921 0.3822 METVQSCLTDAKIDKKLVDDVVLVGGSSRIPKVQQLLQDFFNGKDLCVSINPDEAVAYGAAVQGALLGKGIKSFPNLVLRDVTPLSLGISLKDDIMSVLIPRNSTIPVKTKKVFHTCEDDQPGVSIDVYEGERMIATENNLLGLFELEIPLAPRHLPIKVCFAIDADGILTVSAEEETSGNKKDITITKENGRLSTEEIERMIQEAEKFKDEDIKFQKKVKAMNVLDDYLYNMRKVMKDGSVTSMLSSTDKMKINAAMIKGKNLIDDKEHQETFVFVDFLRELESIFESALKKSNRGYSDEESDSE* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2854 306 Pfam Hsp70 protein 2 272 IPR013126 GO:0005524|GO:0140662
Tpr6g2854 306 PANTHER HEAT SHOCK PROTEIN 70KDA 1 295 IPR013126 GO:0005524|GO:0140662
Tpr6g2854 306 ProSitePatterns Heat shock hsp70 proteins family signature 3. 21 35 IPR018181 -
Tpr6g2854 306 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 72 222 IPR029047 -
Tpr6g2854 306 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 222 294 IPR029048 -
Tpr6g2854 306 PANTHER HEAT SHOCK 70 KDA PROTEIN 1 295 - -
Tpr6g2854 306 Gene3D - 223 295 IPR029048 -
Tpr6g2854 306 SUPERFAMILY Actin-like ATPase domain 2 67 IPR043129 -
Tpr6g2854 306 Gene3D - 1 47 - -
Tpr6g2854 306 Gene3D - 48 65 - -
Tpr6g2854 306 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 75 226 IPR029047 -
Tpr6g2854 306 PRINTS 70kDa heat shock protein signature 18 34 - -
Tpr6g2854 306 PRINTS 70kDa heat shock protein signature 50 70 - -
Tpr6g2854 306 PRINTS 70kDa heat shock protein signature 76 95 - -
Tpr6g2854 306 PRINTS 70kDa heat shock protein signature 155 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2854 Tpr-Chr6 31001849 31002899 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2854 1 297 Calmodulin-binding Proteins AT3G12580 57.333 1.83e-108 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2854 K03283 - gmx:102667572 320.087