Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2850 ATGGCCAAAAAATACAAAGGACCTGCTATTGGAATTGACCTTGGCACAACCTATTCATGTGTAGCAGTTTGGCAGGGCCAAAACAATCGTGCAGAGATCATTCACAATGATCAAGGTAACCGAATAACACCTTCTTTTGTTGCTTTCACTACTGATCTAAGGTTGATTGGTGATGCTGCTAAAAATCAAGCCGCTCGAAACCCGGACAACACTATTTTTGATGCAAAGAGGTTGATTGGAAGGAAATATAGTGATTCTGTTATTCAGGATGATATACAGTTGTGGCCATTTAAGGTTGTTGCTGGTACCGATGACAACCCTCAGATTATTGTTCAGTATAAGGGTGAGGAAAAACGCCTTTGTGCTGAGGAAATCTCTTCTATTGTCCTCACAAAGATGCGTGAAATTGCAGAGAAGTTTTTGGAGTCATCAATCAAGAATGCAGTTATTACCGTGCCTGCTTATTTCAACGATTCTCAACGAAAAGCTACAAAAGATGCCGGTGCTATTGCTGGACTTAATGTAATGCGGATAATCAATGAGCCTACTGCTGCTGCACTTGCATATGGCCTTCAGAAGAGAGAAAGTAATGTTGAAAAACGAAATGTCTTCATCTTTGATCTTGGTGGTGGCACTTTTGATGTGTCTCTTCTTACACTTAAGGGCGATAGCTTTGATAACAGAATGGTGAACTATTTAGTTAAGGAATTTAAGAGGAAGCATACAGAGGACATCAGTGGGAATGCGAAGGCCCTTAGGAGGTTGAGAACTGCTTCTGAGAAGGCTAAAAGGACATTGTCATTTGATATTGAGGCTATGATTGACATAGACGCTCTATACCAGGGAATTGACTTCGCTTTGTCAGTCAGTCGAGCCAAGTTTGAGCAACTGAACATGGATCTCTTTGAAAAATGTTTGGAGATTGTTAAGAGTTGTTTTAGTGATGCAAAGATGGACAAAAGTAGTATAGATGATGTTGTACTTGTTGGTGGATCTTCTAGGATTCCCAAAGTGCAGCAGCTATTGCATGAATTTTTTGAAGGGAAGGAACTGTGCAGTAGCATCAATCCGGATGAAGCTGTTGCTTATGGAGCAGCTGTTCAGGCTGCTTTGCTAAGTGAAGACGTTAAGAATGTTCCAAACTTGGTGCTACAAGATGTTACACCTTTGTCACTTGGTGTCTTAACGTATGAAGATACTATGAGTGTGATGATTCCTAGAAATACCTCCATTCCTGTTAAGAAGACAAAAAACTATTTAACAGTTAAAGATTACCAATCTGTTGTCGGAATTAAGGTTTATGAGGGTGAGAGTGTGATTGCGAGTGAGAACAACCTGCTTGGTTTGTTTAAGTTGTATGTTCCTCGTGCACCTCGTGATCTTCCTTTCCAGGTATGCTTTACTATAGATGCCGATGGTATATTAAACGTCTCTGCTGAGGAAGAAAGCAGTGGTAATAAGGAAGATATTACAATAACGAATGAAAATGGAAGATTGTCATGCGAAGAAATTGAAAGAATGATAAAGGAAGCTGAGCACTTCAAGTCTGAAGACATGAAGCATATGGAGAAGGTTAGATCAATGAATGCTTTGGATAAGAGAAAATAA 1608 0.398 MAKKYKGPAIGIDLGTTYSCVAVWQGQNNRAEIIHNDQGNRITPSFVAFTTDLRLIGDAAKNQAARNPDNTIFDAKRLIGRKYSDSVIQDDIQLWPFKVVAGTDDNPQIIVQYKGEEKRLCAEEISSIVLTKMREIAEKFLESSIKNAVITVPAYFNDSQRKATKDAGAIAGLNVMRIINEPTAAALAYGLQKRESNVEKRNVFIFDLGGGTFDVSLLTLKGDSFDNRMVNYLVKEFKRKHTEDISGNAKALRRLRTASEKAKRTLSFDIEAMIDIDALYQGIDFALSVSRAKFEQLNMDLFEKCLEIVKSCFSDAKMDKSSIDDVVLVGGSSRIPKVQQLLHEFFEGKELCSSINPDEAVAYGAAVQAALLSEDVKNVPNLVLQDVTPLSLGVLTYEDTMSVMIPRNTSIPVKKTKNYLTVKDYQSVVGIKVYEGESVIASENNLLGLFKLYVPRAPRDLPFQVCFTIDADGILNVSAEEESSGNKEDITITNENGRLSCEEIERMIKEAEHFKSEDMKHMEKVRSMNALDKRK* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2850 535 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 378 532 IPR029047 -
Tpr6g2850 535 Gene3D - 73 128 - -
Tpr6g2850 535 PANTHER HEAT SHOCK PROTEIN 70KDA 4 533 IPR013126 GO:0005524|GO:0140662
Tpr6g2850 535 Gene3D - 353 369 - -
Tpr6g2850 535 Gene3D - 10 193 - -
Tpr6g2850 535 ProSitePatterns Heat shock hsp70 proteins family signature 3. 326 340 IPR018181 -
Tpr6g2850 535 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 533 - -
Tpr6g2850 535 Pfam Hsp70 protein 9 532 IPR013126 GO:0005524|GO:0140662
Tpr6g2850 535 Gene3D - 194 221 - -
Tpr6g2850 535 Gene3D - 305 352 - -
Tpr6g2850 535 ProSitePatterns Heat shock hsp70 proteins family signature 2. 205 218 IPR018181 -
Tpr6g2850 535 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr6g2850 535 SUPERFAMILY Actin-like ATPase domain 200 373 IPR043129 -
Tpr6g2850 535 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 38 50 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 60 68 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 148 168 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 211 221 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 323 339 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 355 375 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 381 400 - -
Tpr6g2850 535 PRINTS 70kDa heat shock protein signature 460 476 - -
Tpr6g2850 535 Gene3D Actin; Chain A, domain 4 222 304 - -
Tpr6g2850 535 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 370 534 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2850 Tpr-Chr6 30969905 30972135 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2850 1 532 Calmodulin-binding Proteins AT3G12580 64.791 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2850 K03283 - gmx:102667578 721.465