Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2838 ATGGCGGAAAGGTATGCTGTAGGAATAGACCTTGGAACAACCTATTCTTGTGTTGCTGTTTGGTTGGAGGATAAAAACAGAGTTGAGATAATCCACAACGATGAAGGCAACAAAATCACACCCTCCTTTGTAGCTTTCACTGATCATCAGAGGTTGGTCGGTGGTTCTGCTAAGGATCAAGCTGCCATCAATCCACAAAACACTGTTTTTGATGCAAAGAGGTTAATTGGTAGGAAATTCAGTGACCCTATTGTTCAAAAAGATATATTACTGTGGCCATTTAAGGTTATTTCTGGCGTTAATGACAAACCTATGATTAGTGTTAAGTACAAAGGCCAGGAGAAGCTTCTTTGTGCGGAGGAAATTTCATCTATTGTCCTCACAAATATGAAAGAAATTGCAGAGGCATATTTGGAATCACCGGTTAAAGATGTAGTTGTTACTGTTCCAGCTTATTTCAACGATTCTCAGCGAAAAGCCACCATGGATGCCGGTGCCATTGCTGGCCTTAATGTTATGCGAATTATTAATGAACCCACTGCTGCCGCCATTGCATATGGCCTTGATAAGAGAGCTAACTGTGAAGGTGAAAGGAATATTTTTGTGTTTGATCTTGGTGGTGGAACTTTTGATGTGTCTCTCCTGACAATTAAAGGTGATGTCTTTGAAGTTAAAGCTACTGCTGGAAACACTCACATTGGAGGAGAGGACTTTGACAATAGAATGTTGAACTACTTTGTCGAGGAATTTAAGAGGAAGAACAAAGTGGATATCACTAGGAATCCAAGAGCCTTGAGAAGGTTGAAAACTGCATGTGAAAAGGCAAAAAGGACACTAACATTCAAATCACTCGCCTCTATTGAGATAGATAATTTATTTGAGGGCATTGACTTCTCTTCATCGATCACTCGTGTCAAATTTGAGGAAATTAATATGGACCTTTTTAATGAGTGTATGAAGACTGTTGAGAGTTGTTTTACTGATTCAAAGATGGACAAGAGCAGTGTAGATGATATTGTTCTTGTGGGTGGCTCGTCTAGGATTCCCAAAGTGCAGAAACTGTTGCGTGATTTCTTCAATGGGAAGTATTTGTGCAAGAGCATCAATCCTGATGAGGCTGTTGCTTGTGGGGCAGCAGTTCATGCTGCTTTGCTGAGTGAAGGGCTTAAGAATGTTCCAAACTTGGTGCTGCGAGATGTTACACCCTTGTCACTTGGTATTTCAATAAATCCAGGTATACGTGCCATGGATGTGGTAATTCCTAGGAACACTTCCATCCCTGTCAAGAAAGCAAAAGGATATGGAACACCTAAGGATAGTTGTGGTGTCTCTATTGAGGTTTATGAGGGTGAGAGAGCAAGTGTTGCAGACAACAATCTGCTTGGTTCTTTTATTCTTTTTTGTCCTGGTGTTCCTGGTGACATGCCCGTGGAGGTATGCTTTACTATCGATGAAAATGGTATCTTAACTGTTTCTGCAAAGGAAAAATCTACCGGTAATAAGAACGAGATCACAATAACCAACGACAGAGAAAGGTTATCTACAGAAGAAATTAAAAAATTGATTGAAGAAGCTAGAGAGTATCACGCTGAAGATGAGAGATTCCTAAGAAAGGCTAAGGTAATGAATGAATTAGATGACTGCATTTACAAGCTGACGAATGCTCTAAAGAATGAGGATGTTAAATCAAACCTATCATCTCATAAAATTAAAAAGATCAATCTTGCAATTACTAAGGCTACAAATTTGCTTGATAAGAACAAGCACCAGAATGAACTACATGTTCTCGAAAATCATTTGAAGGGGCTTGAAAGTATTTTGGAAGACATTGAAATCAAGAATGGCTAG 1848 0.3945 MAERYAVGIDLGTTYSCVAVWLEDKNRVEIIHNDEGNKITPSFVAFTDHQRLVGGSAKDQAAINPQNTVFDAKRLIGRKFSDPIVQKDILLWPFKVISGVNDKPMISVKYKGQEKLLCAEEISSIVLTNMKEIAEAYLESPVKDVVVTVPAYFNDSQRKATMDAGAIAGLNVMRIINEPTAAAIAYGLDKRANCEGERNIFVFDLGGGTFDVSLLTIKGDVFEVKATAGNTHIGGEDFDNRMLNYFVEEFKRKNKVDITRNPRALRRLKTACEKAKRTLTFKSLASIEIDNLFEGIDFSSSITRVKFEEINMDLFNECMKTVESCFTDSKMDKSSVDDIVLVGGSSRIPKVQKLLRDFFNGKYLCKSINPDEAVACGAAVHAALLSEGLKNVPNLVLRDVTPLSLGISINPGIRAMDVVIPRNTSIPVKKAKGYGTPKDSCGVSIEVYEGERASVADNNLLGSFILFCPGVPGDMPVEVCFTIDENGILTVSAKEKSTGNKNEITITNDRERLSTEEIKKLIEEAREYHAEDERFLRKAKVMNELDDCIYKLTNALKNEDVKSNLSSHKIKKINLAITKATNLLDKNKHQNELHVLENHLKGLESILEDIEIKNG* 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2838 615 Pfam Hsp70 protein 6 608 IPR013126 GO:0005524|GO:0140662
Tpr6g2838 615 Gene3D - 7 383 - -
Tpr6g2838 615 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 391 546 IPR029047 -
Tpr6g2838 615 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 542 613 IPR029048 -
Tpr6g2838 615 Gene3D - 543 613 IPR029048 -
Tpr6g2838 615 Gene3D Actin; Chain A, domain 4 234 317 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 5 18 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 35 47 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 57 65 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 145 165 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 208 218 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 336 352 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 368 388 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 394 413 - -
Tpr6g2838 615 PRINTS 70kDa heat shock protein signature 474 490 - -
Tpr6g2838 615 Gene3D - 191 365 - -
Tpr6g2838 615 Gene3D - 70 125 - -
Tpr6g2838 615 SUPERFAMILY Actin-like ATPase domain 195 386 IPR043129 -
Tpr6g2838 615 ProSitePatterns Heat shock hsp70 proteins family signature 3. 339 353 IPR018181 -
Tpr6g2838 615 SUPERFAMILY Actin-like ATPase domain 4 190 IPR043129 -
Tpr6g2838 615 ProSitePatterns Heat shock hsp70 proteins family signature 2. 202 215 IPR018181 -
Tpr6g2838 615 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 390 542 IPR029047 -
Tpr6g2838 615 PANTHER HEAT SHOCK PROTEIN 70KDA 3 611 IPR013126 GO:0005524|GO:0140662
Tpr6g2838 615 PANTHER HEAT SHOCK 70 KDA PROTEIN 3 611 - -
Tpr6g2838 615 ProSitePatterns Heat shock hsp70 proteins family signature 1. 9 16 IPR018181 -
Tpr6g2838 615 Coils Coil 586 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2838 Tpr-Chr6 30806935 30809300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2838 2 610 Calmodulin-binding Proteins AT3G12580 63.622 0.0 768
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2838 K03283 - gmx:102667572 852.432