Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2837 ATGGCCAGAAATAATGAGGGACCTGTGATTGGAATTGACCTTGGCACAACCTACTCACGAGTCGCTGTATGGCAGGAGCAAAACAATAGCGCAGTGATTATCCGCGACGAACAAGGCAACATAACCATCCCTTCGTTTGTTGCTTTCACTAATTCTCAAAAGTTGGTTGGTGATGCTGCTAAAGATCAGGTTGCCTCTAACCCATCCAACACCATCTTTGATGCAAAGAAGTTGATTGGAAGGAAATATAGTGATCCCATAATTCAGAACAATCTAAGGTTATGGCCTTTCAAGGTCATTTCTAGTACAAATGACAAACCTATGATTGTTGTTAAGTACAAAGGTAAGGAAAAACACCTTTTTCCTGAAGAAATATTATCTATAATAATCAAAAAGATGCTAGAGATGGCAGAGAAATTTTTAGAGTCACATGTCAAAACTGTAGTGATCACTGTGCCTGCTTATTTTGACAACTCTCAGCGGGTAGCCATGAAAGATGCTGGTCTCATTGCTGGCCTAAATGTAATGCAGATAATTAACGAACCAATTGCTGCAGCTCTTACATATGGTCTACATACGAGGGCCAATTGTGTTGAAAATAAAAATATTTTTATTTGTGATATCGGTGGTGGAACTTTCGGTGTGTCTCTCATCACACTCAAGGGTGACAAGTATGAAATAAAGGCAACGGCCGAGACACAATTTGGAGGAGAGGATTTTAGTGATAGAATGGTGAACCATTTTGTGAAGGAGTTCAAAAGGAGGCATGGAATTGAGATTAGTGGAAATTCGAGTGCCCTTAGGAGGTTGAGAATTGAGTGTGAGAGGGCAAAAAGGACACTTTCTTATCGCTATGAGGTCATAATTAAAGTTGATGCTATATGTCATGATATTTACTTTGATCGCTCGATCACTCGGGCTAAGTTTGAGCAACTCAACATGGACCTCTTTGAAAAGTTTATGAATATCGTTGAGAGTTGTCTTACTAATGCTAAAATAGGCACGAGTAGTGTAGATGATGTCGTACTTGTTGGTGGCTCGTCAAAGATTCCCAAAATTCAGAATCTTCTAGAAGACTTTTTTAAAAAAGGGGTGAAACTGTTTGATCCTGATGAGGCTAAGGCTGCTGCATATGGTGCAGCAATCCAAGCTGCTTTGTTAAGGGGAGGCCTTAAGAATGTTCCAATGAATGTGCATCAATATCTTACCCGGATGTCTCTTGCAGGGGAACCAATACATGGAAAAATAGAGAAAAATAAAAAAGTAAATGTTACAATTGAAGATAACAAATCCAGTGTTACGATTGATTTTCAAGAGGGTTCTGGAATAACGATTAATATTCCTGGTTCATCTAATATCTCACTTCCTGATCCTGCTTTTGAATTTCCTATTAATGTCTGCTTTGCTGCAGATTCCGATGGTATGTTAAATGTCTCTGCTGAGGTACAAACCGTTTCCAAAGATATCATAATAACCAATGAAAATGTAAGGCTGGAGTTACGAAACCAACATAAAAACCTTTCTTAG 1527 0.3883 MARNNEGPVIGIDLGTTYSRVAVWQEQNNSAVIIRDEQGNITIPSFVAFTNSQKLVGDAAKDQVASNPSNTIFDAKKLIGRKYSDPIIQNNLRLWPFKVISSTNDKPMIVVKYKGKEKHLFPEEILSIIIKKMLEMAEKFLESHVKTVVITVPAYFDNSQRVAMKDAGLIAGLNVMQIINEPIAAALTYGLHTRANCVENKNIFICDIGGGTFGVSLITLKGDKYEIKATAETQFGGEDFSDRMVNHFVKEFKRRHGIEISGNSSALRRLRIECERAKRTLSYRYEVIIKVDAICHDIYFDRSITRAKFEQLNMDLFEKFMNIVESCLTNAKIGTSSVDDVVLVGGSSKIPKIQNLLEDFFKKGVKLFDPDEAKAAAYGAAIQAALLRGGLKNVPMNVHQYLTRMSLAGEPIHGKIEKNKKVNVTIEDNKSSVTIDFQEGSGITINIPGSSNISLPDPAFEFPINVCFAADSDGMLNVSAEVQTVSKDIIITNENVRLELRNQHKNLS* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2837 508 SUPERFAMILY Actin-like ATPase domain 199 388 IPR043129 -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 38 50 - -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 60 68 - -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 148 168 - -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 211 221 - -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 338 354 - -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 370 390 - -
Tpr6g2837 508 PRINTS 70kDa heat shock protein signature 461 477 - -
Tpr6g2837 508 SUPERFAMILY Actin-like ATPase domain 8 192 IPR043129 -
Tpr6g2837 508 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr6g2837 508 Gene3D - 194 365 - -
Tpr6g2837 508 Gene3D - 10 385 - -
Tpr6g2837 508 PANTHER HEAT SHOCK PROTEIN 70KDA 4 502 IPR013126 GO:0005524|GO:0140662
Tpr6g2837 508 Pfam Hsp70 protein 9 492 IPR013126 GO:0005524|GO:0140662
Tpr6g2837 508 Gene3D - 73 128 - -
Tpr6g2837 508 Gene3D Actin; Chain A, domain 4 236 319 - -
Tpr6g2837 508 Coils Coil 493 508 - -
Tpr6g2837 508 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2837 Tpr-Chr6 30802176 30804091 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2837 1 498 Calmodulin-binding Proteins AT3G12580 52.692 3.07e-171 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2837 K03283 - gmx:102667578 491.886