Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2834 ATGGCAAAAAAATATGAGGGATGTGCTGTGGGAATTGATCTTGGAACAACTTATTCATGTGTTGCTGTGTGGCTTGATGAACACAATAGAGTAGAGATTATTCACAATGATCAAGGCAACAGAACAACACCTTCTGTTGTTGCTTTCACTCATGATCAAAGATTGATCGGTGATGCTGCTAAGAATCAGGCTGCCACCAACGCACAAAACACTGTTTTTGATGCTAAGAGGTTAATTGGTAGGAGGTATAGTGATTCTATTGTTCAAAATGACATAAAGTTGTGGCCATTCAAGGTCATTGCGGGTGTGAATGACAAACCTGTGATTACAGTTAAGTACAAGGGTCAAGAGAAGCAATTTTGTGCTGAGGAAATATCATCTATGATTCTGAAAAAGATGAAAGAGGTTGCCGAGGCATATATAGGGTCTCCTGTAAAAAATGCTGTTGTTACTGTTCCTGCTTATTTCAATGATTCTCAGCGAAAAGCCACCATAGATGCTGGTTCTATTGCTGGCCTTAATGTCATCCGGATAATCAATGAACCTACTGCGGCAGCTATTGCATATGGCCTTGACAAGAGAATTGATGGTAAACGAAATATTTTTGTCTTTGATCTTGGTGGTGGTACTTTTGATGTATCTATTCTCACTATTAAGGGCGATGTCTTTGAAGTAAAAGCCACAGCTGGAAACACTCACCTTGGGGGAGAGGACTTTGATAACAGAATGGTGAACTACTTTGTAGAGGAGTTCAAAAAGAAGAAGAATAATGTGGACATTAGTGGGAACCCAAAATCATTACGGAGGTTGAGAACTGCTTGCGAGAGGGCAAAAAGGACACTCTCTTTTGCTTTTGCCACCACTGTGGAGGTGGATTCTTTATGTATGGGAATCGACTTTTCTTCATCAATCACTCGTGCTAAATTTGAGGAAATTAATATGGACTTTTTCAATGACTGTATGACAATTGTTGATAGTTGTCTTAGGGATTCAAAGATATGCAAGAGTGATATTGATGATGTTGTTCTTGTGGGTGGCTCATCTAGGATTCCAAAAGTGCAAGATCTATTGCTAGAATTTTTCAAGGGGAAGGAGTTGTTCATGCGTATCAACCCAGATGAAGCTGTTGCTTATGGTGCAGCTGTTCATGCGGCTATTTTGAGTGAAGGCTTTAAGAATGTACCTAATTTGGTGCTACAAGATGTTACCCCACTGTCACTTGGAATTGGTATCCAACAAGATGTCATGAGTGTGGTGATTCCTAGAAACAGTTCCATACCTGTCAAGAAGACACAAAGATATTCTAAATTTGATGCTTATCGCAATCCCATTATTAATGTTTATGAGGGAGAGAGAGCACGAGCTCCCGACAATAATCTGCTAGGTTCATTTGTTCTTTCTTGTCTTCCAAATGCTCCCCGTGGCACCCCGTTGGAGGTATGCTTTTCTATCAATGAAAATGGCATCATGACGGTTTATGCTAAGGAAATATCTACTGGAAATATGAATGAGATCACCATAACAAATGACAAAGAAAGGTTGTCAAGATTTGATATTAAAAGAAAGATTGAAGAAGCTGAGACATACCATGTGGAAGACATGAAATTTTTAAAGAAGGCCAAGGTAATGAGTGCATTGGATTCTTGTGTATACAATATGAAGACTGCTTTACAGGAGAAGGATGTTAATCTTATTCTCGCCCCTCAAGAAATAGAGAAGATCAACAATGCAATTACTTTCGCTATGAATTTGCTTGATAAGAATAACCTACAGGAAGAAATAGATGTTATTGAGGGTCATCTGAATGAGTTGCAGAGCATGTTGAAACCCCTTATAGCCAAGACTAGACGTGCCGTAGGAATAGACCTTGGAACGACATATTCATGTGTTGCTGTGTGGCTGGAGGAAAAAAACAGAGTTGAGATTATTCACAATGATCAAGGAAACAAAACAACACCTTCTGTTGTTGCTTTCACTGATGATCAAAAGCTGATTGGTGATGCTGCTAAGAATCAATCGACGACCAACCCTGAAAACTCCGTCTTTGATGCTAAGAGGTTAATTGGTAGAAAGTTTAGTGATTCGGTTGTTCAGAAAGACATAATGTTGTGGCCATTTAAGGTCACTGCTGATGTGAATGACAAACCCATGATTACTGTGAAGTACAAGGGTCAAGAGAAACAATTTTGTGCTGAGGAAATATCATCTATGGTCCTTACAACGATGCGAAAAGTTGCAGAGACATATCTAATGACACCTCGAAAAGCCACCATAGATGCTGGTGCCATTGTAAGCTTTTCTATCAATGAATATGGCATCTTAACCGTTTCTGCCAAGGAAATATCTACAGGAAATACAAACGAGATCACCATAACAAATGAAAAACAAAGATTGTCAACATGCGAAATTAAAAAAATTATTGAAGATGCTAAAAGATACCGCGTCGAAGACAAGAAATTTTTAAGGATGGCCAAGGTAAGTAATGAATTGGAAGCTTGTGTTTACAATATGAATAAGATTTTAAAGATGAAGGAGGTTAGTTTACAGCTCTCCCATAAAGAAAGTGAAAAGATTATCAATGCAATCATTGTGGCGACAAACTTGCTTCATATGAATAACAAAGAGAAAGAAATAGGTGTTCATAAGTATCAACTGAAGGAACTAGAGAAAATGTTGAAACACCTTAAAGTTAAGGCAGGCATTGAGAAGCCCAAATTTTCTTTTTTAAGATCTCTTATTAACAGCTTGGAGGATCTTGTTCTCCACAGTTAA 2772 0.3835 MAKKYEGCAVGIDLGTTYSCVAVWLDEHNRVEIIHNDQGNRTTPSVVAFTHDQRLIGDAAKNQAATNAQNTVFDAKRLIGRRYSDSIVQNDIKLWPFKVIAGVNDKPVITVKYKGQEKQFCAEEISSMILKKMKEVAEAYIGSPVKNAVVTVPAYFNDSQRKATIDAGSIAGLNVIRIINEPTAAAIAYGLDKRIDGKRNIFVFDLGGGTFDVSILTIKGDVFEVKATAGNTHLGGEDFDNRMVNYFVEEFKKKKNNVDISGNPKSLRRLRTACERAKRTLSFAFATTVEVDSLCMGIDFSSSITRAKFEEINMDFFNDCMTIVDSCLRDSKICKSDIDDVVLVGGSSRIPKVQDLLLEFFKGKELFMRINPDEAVAYGAAVHAAILSEGFKNVPNLVLQDVTPLSLGIGIQQDVMSVVIPRNSSIPVKKTQRYSKFDAYRNPIINVYEGERARAPDNNLLGSFVLSCLPNAPRGTPLEVCFSINENGIMTVYAKEISTGNMNEITITNDKERLSRFDIKRKIEEAETYHVEDMKFLKKAKVMSALDSCVYNMKTALQEKDVNLILAPQEIEKINNAITFAMNLLDKNNLQEEIDVIEGHLNELQSMLKPLIAKTRRAVGIDLGTTYSCVAVWLEEKNRVEIIHNDQGNKTTPSVVAFTDDQKLIGDAAKNQSTTNPENSVFDAKRLIGRKFSDSVVQKDIMLWPFKVTADVNDKPMITVKYKGQEKQFCAEEISSMVLTTMRKVAETYLMTPRKATIDAGAIVSFSINEYGILTVSAKEISTGNTNEITITNEKQRLSTCEIKKIIEDAKRYRVEDKKFLRMAKVSNELEACVYNMNKILKMKEVSLQLSHKESEKIINAIIVATNLLHMNNKEKEIGVHKYQLKELEKMLKHLKVKAGIEKPKFSFLRSLINSLEDLVLHS* 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2834 923 Gene3D - 10 385 - -
Tpr6g2834 923 SUPERFAMILY Actin-like ATPase domain 196 388 IPR043129 -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 8 21 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 38 50 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 60 68 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 148 168 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 209 219 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 338 354 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 370 390 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 396 415 - -
Tpr6g2834 923 PRINTS 70kDa heat shock protein signature 475 491 - -
Tpr6g2834 923 Pfam Hsp70 protein 764 895 IPR013126 GO:0005524|GO:0140662
Tpr6g2834 923 Pfam Hsp70 protein 618 752 IPR013126 GO:0005524|GO:0140662
Tpr6g2834 923 Pfam Hsp70 protein 9 614 IPR013126 GO:0005524|GO:0140662
Tpr6g2834 923 PANTHER HEAT SHOCK 70 KDA PROTEIN 4 615 - -
Tpr6g2834 923 PANTHER HEAT SHOCK 70 KDA PROTEIN 764 898 - -
Tpr6g2834 923 PANTHER HEAT SHOCK 70 KDA PROTEIN 615 756 - -
Tpr6g2834 923 PANTHER HEAT SHOCK PROTEIN 70KDA 615 756 IPR013126 GO:0005524|GO:0140662
Tpr6g2834 923 PANTHER HEAT SHOCK PROTEIN 70KDA 4 615 IPR013126 GO:0005524|GO:0140662
Tpr6g2834 923 PANTHER HEAT SHOCK PROTEIN 70KDA 764 898 IPR013126 GO:0005524|GO:0140662
Tpr6g2834 923 Gene3D - 194 367 - -
Tpr6g2834 923 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Tpr6g2834 923 Gene3D Actin; Chain A, domain 4 235 319 - -
Tpr6g2834 923 Coils Coil 871 891 - -
Tpr6g2834 923 ProSitePatterns Heat shock hsp70 proteins family signature 3. 341 355 IPR018181 -
Tpr6g2834 923 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 392 543 IPR029047 -
Tpr6g2834 923 Gene3D - 616 779 - -
Tpr6g2834 923 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 393 540 IPR029047 -
Tpr6g2834 923 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Tpr6g2834 923 Gene3D - 682 733 - -
Tpr6g2834 923 Gene3D - 73 128 - -
Tpr6g2834 923 SUPERFAMILY Actin-like ATPase domain 8 193 IPR043129 -
Tpr6g2834 923 ProSitePatterns Heat shock hsp70 proteins family signature 1. 621 628 IPR018181 -
Tpr6g2834 923 Gene3D - 798 899 IPR029048 -
Tpr6g2834 923 SUPERFAMILY Actin-like ATPase domain 617 766 IPR043129 -
Tpr6g2834 923 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 763 831 IPR029047 -
Tpr6g2834 923 Coils Coil 587 607 - -
Tpr6g2834 923 Gene3D - 544 615 IPR029048 -
Tpr6g2834 923 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 544 619 IPR029048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2834 Tpr-Chr6 30788133 30793971 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2834 764 891 Calmodulin-binding Proteins AT3G12580 37.500 2.84e-16 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2834 K03283 - gmx:102667578 816.994