Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2824 ATGCATAAAAATCTCACCGATGGAGAACAACAACCACCGCCGGAAAATGAAACGGAGGAAGACAACAAAAAAGAAACCGCTGAATCTCCTCCTCATAGCCTTGACAATATTTCACATGACATTGATCAATTTCTTGTTGCCAATGAGAATAATGAAGGAGTTTCGATCGAGATTCCTGATTGTGTAGAAAAGTTTTTGGATCGTGTGGCGGAGAATTTAGCGAAATGTGAAACAGAAGGTAAAGCGAAATGGGAAGAGATTCTGGTGAAAGATCCATGGTTGCTTGAATCTGTGAATCGGATTTCGAAACTTAAGAAAATTCTGACGACGACTCATCATGATGAAAACGAAAGAAGCAATTCGATATCGAATCGTATCGGTGTAATTCAACAGAAAGCGATGTCGTTTTTGGAAGAAGATTTTCGGTTGTTGATAGAAGATTCTAGAATTCCAACCAATTTGAAACCTGCTGCACAGAAGGAAGGGGAATCTAAAGATCAGATTCAACAGGAAGAATCCGATCCGAATTTTCCGGGTTATACGGACGAGGTGATTGCTTGTATGAGTAAGATTGCTGGCACGATGTTGAACGGCGGATATGAATCGGAGATTTGTCAGGTGTACATTATGGCGCGAAGGACGGCTTTCGAGGAGATTCAACGACAGCTAGGGTTGGAAAGAGTCAGCATTGATGATATGGTTCAGAAGGTTCAATGGGAGATTCTAGCAAGAGACATGATTCCGGCGTGGACAAACACGTTTCGTCAGTGCGCCGGGGTGTATTTTCCCGGGGAAAAGAAATTAGCCAAGGCGGTGTTTTCAAGTCATCCGTCTGTTGCGGAGGGCTTGTTTAACAGCATCTCCTGCGGAGTTGTGATTCCTCTTCTCAACTTCGCAGAAGGTGCTGCCATGACAAAGCGCGCTGGAGAGAAGCTTTTCAAATTGCTTGACATGTACGAAACTCTTAGAGATGTTATACCAAAGTTGGATGGACTCTTTCCAGAAGAGTCCTCCGAAGAGTTAAAGACAGAGATAAACGTCGCCAAGACACGCCTTGGCGAGTCAGTTATCTCTATCTTTTGTGACTTGGAAAATCAAATCAAATCAGAACCTGCAAAGAATCCGGTCCCTGGTGGCGCGGTTCATCCTCTCACACGCTACATAATGAACTACCTCAACATAGCTGGTGATTACACAGAAACACTTGATCAAGTTTTCAAGGACAATTCAAAGATCGAACGCGCAGATTCAACTAGTAGATCTGATCATGATCCCAATGAAGCGTTGTCACCATTTGCGGCACAAGTAATAAGAATCATGGAATTACTCGAAACGAGCCTAGATGGGAAAGCAAAATTGTACAAAGACGTGGCATTAAGCAACTTCTTCATGATGAACAATGGTAGATACATTTTACAAAAAATTAAAGCGTCAAATGAAATGAGCGAATTGTTGGGTGCAACATGGTGTAGAAAGAAATCTTCTGAATTAAGAAACTACCACAAAACCTACCAAAGAGAAACATGGAATAGAGTTCTAACATGTCTGAGTCATGAAGGGTTGAGTGTAAATGGAAAGGTGCAAAAACCAGTACTGAAAGAGAGGTTCAAAAGCTTCAATTCAATGTTTGATGACATTCATAAGACACAAAGCTCATGGGTTGTGAAGGATGAACAACTTCAATCAGAGCTTCGGGTTTCCATATCGGCCGTGGTGATTCCGGCGTATAGGGCATTTGTTGGGAGGTTTTCACAGAATTTAGATGCTGGAAGACAGACAGAGAAATATATAAAGTATCAACCTGAGGATATAGAGACTTATATTGATGAGTTATTTGAAGGAAAACAACCTCATGAAAAGGAAAACAAAAGAAAAGGAAAACATAACTTTTAG 1893 0.4136 MHKNLTDGEQQPPPENETEEDNKKETAESPPHSLDNISHDIDQFLVANENNEGVSIEIPDCVEKFLDRVAENLAKCETEGKAKWEEILVKDPWLLESVNRISKLKKILTTTHHDENERSNSISNRIGVIQQKAMSFLEEDFRLLIEDSRIPTNLKPAAQKEGESKDQIQQEESDPNFPGYTDEVIACMSKIAGTMLNGGYESEICQVYIMARRTAFEEIQRQLGLERVSIDDMVQKVQWEILARDMIPAWTNTFRQCAGVYFPGEKKLAKAVFSSHPSVAEGLFNSISCGVVIPLLNFAEGAAMTKRAGEKLFKLLDMYETLRDVIPKLDGLFPEESSEELKTEINVAKTRLGESVISIFCDLENQIKSEPAKNPVPGGAVHPLTRYIMNYLNIAGDYTETLDQVFKDNSKIERADSTSRSDHDPNEALSPFAAQVIRIMELLETSLDGKAKLYKDVALSNFFMMNNGRYILQKIKASNEMSELLGATWCRKKSSELRNYHKTYQRETWNRVLTCLSHEGLSVNGKVQKPVLKERFKSFNSMFDDIHKTQSSWVVKDEQLQSELRVSISAVVIPAYRAFVGRFSQNLDAGRQTEKYIKYQPEDIETYIDELFEGKQPHEKENKRKGKHNF* 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2824 630 SUPERFAMILY Cullin repeat-like 83 613 IPR016159 -
Tpr6g2824 630 MobiDBLite consensus disorder prediction 1 37 - -
Tpr6g2824 630 Pfam Exo70 exocyst complex subunit 250 610 IPR046364 GO:0000145|GO:0005546|GO:0006887
Tpr6g2824 630 PANTHER EXOCYST SUBUNIT EXO70 FAMILY PROTEIN 25 619 - -
Tpr6g2824 630 PANTHER EXOCYST COMPLEX PROTEIN EXO70 25 619 IPR004140 GO:0000145|GO:0006887
Tpr6g2824 630 Gene3D Exocyst complex component Exo70 83 622 - -
Tpr6g2824 630 MobiDBLite consensus disorder prediction 16 30 - -
Tpr6g2824 630 MobiDBLite consensus disorder prediction 154 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2824 Tpr-Chr6 30695291 30697676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2824 9 614 EXO70 exocyst subunit family AT5G13990 47.678 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2824 K07195 - gmx:100820172 827.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tpr6g2824 6 30695291 30697676 Tpr2g0045 2 594664 597456 PCT