LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Tpr6g2824	ATGCATAAAAATCTCACCGATGGAGAACAACAACCACCGCCGGAAAATGAAACGGAGGAAGACAACAAAAAAGAAACCGCTGAATCTCCTCCTCATAGCCTTGACAATATTTCACATGACATTGATCAATTTCTTGTTGCCAATGAGAATAATGAAGGAGTTTCGATCGAGATTCCTGATTGTGTAGAAAAGTTTTTGGATCGTGTGGCGGAGAATTTAGCGAAATGTGAAACAGAAGGTAAAGCGAAATGGGAAGAGATTCTGGTGAAAGATCCATGGTTGCTTGAATCTGTGAATCGGATTTCGAAACTTAAGAAAATTCTGACGACGACTCATCATGATGAAAACGAAAGAAGCAATTCGATATCGAATCGTATCGGTGTAATTCAACAGAAAGCGATGTCGTTTTTGGAAGAAGATTTTCGGTTGTTGATAGAAGATTCTAGAATTCCAACCAATTTGAAACCTGCTGCACAGAAGGAAGGGGAATCTAAAGATCAGATTCAACAGGAAGAATCCGATCCGAATTTTCCGGGTTATACGGACGAGGTGATTGCTTGTATGAGTAAGATTGCTGGCACGATGTTGAACGGCGGATATGAATCGGAGATTTGTCAGGTGTACATTATGGCGCGAAGGACGGCTTTCGAGGAGATTCAACGACAGCTAGGGTTGGAAAGAGTCAGCATTGATGATATGGTTCAGAAGGTTCAATGGGAGATTCTAGCAAGAGACATGATTCCGGCGTGGACAAACACGTTTCGTCAGTGCGCCGGGGTGTATTTTCCCGGGGAAAAGAAATTAGCCAAGGCGGTGTTTTCAAGTCATCCGTCTGTTGCGGAGGGCTTGTTTAACAGCATCTCCTGCGGAGTTGTGATTCCTCTTCTCAACTTCGCAGAAGGTGCTGCCATGACAAAGCGCGCTGGAGAGAAGCTTTTCAAATTGCTTGACATGTACGAAACTCTTAGAGATGTTATACCAAAGTTGGATGGACTCTTTCCAGAAGAGTCCTCCGAAGAGTTAAAGACAGAGATAAACGTCGCCAAGACACGCCTTGGCGAGTCAGTTATCTCTATCTTTTGTGACTTGGAAAATCAAATCAAATCAGAACCTGCAAAGAATCCGGTCCCTGGTGGCGCGGTTCATCCTCTCACACGCTACATAATGAACTACCTCAACATAGCTGGTGATTACACAGAAACACTTGATCAAGTTTTCAAGGACAATTCAAAGATCGAACGCGCAGATTCAACTAGTAGATCTGATCATGATCCCAATGAAGCGTTGTCACCATTTGCGGCACAAGTAATAAGAATCATGGAATTACTCGAAACGAGCCTAGATGGGAAAGCAAAATTGTACAAAGACGTGGCATTAAGCAACTTCTTCATGATGAACAATGGTAGATACATTTTACAAAAAATTAAAGCGTCAAATGAAATGAGCGAATTGTTGGGTGCAACATGGTGTAGAAAGAAATCTTCTGAATTAAGAAACTACCACAAAACCTACCAAAGAGAAACATGGAATAGAGTTCTAACATGTCTGAGTCATGAAGGGTTGAGTGTAAATGGAAAGGTGCAAAAACCAGTACTGAAAGAGAGGTTCAAAAGCTTCAATTCAATGTTTGATGACATTCATAAGACACAAAGCTCATGGGTTGTGAAGGATGAACAACTTCAATCAGAGCTTCGGGTTTCCATATCGGCCGTGGTGATTCCGGCGTATAGGGCATTTGTTGGGAGGTTTTCACAGAATTTAGATGCTGGAAGACAGACAGAGAAATATATAAAGTATCAACCTGAGGATATAGAGACTTATATTGATGAGTTATTTGAAGGAAAACAACCTCATGAAAAGGAAAACAAAAGAAAAGGAAAACATAACTTTTAG	1893	0.4136	MHKNLTDGEQQPPPENETEEDNKKETAESPPHSLDNISHDIDQFLVANENNEGVSIEIPDCVEKFLDRVAENLAKCETEGKAKWEEILVKDPWLLESVNRISKLKKILTTTHHDENERSNSISNRIGVIQQKAMSFLEEDFRLLIEDSRIPTNLKPAAQKEGESKDQIQQEESDPNFPGYTDEVIACMSKIAGTMLNGGYESEICQVYIMARRTAFEEIQRQLGLERVSIDDMVQKVQWEILARDMIPAWTNTFRQCAGVYFPGEKKLAKAVFSSHPSVAEGLFNSISCGVVIPLLNFAEGAAMTKRAGEKLFKLLDMYETLRDVIPKLDGLFPEESSEELKTEINVAKTRLGESVISIFCDLENQIKSEPAKNPVPGGAVHPLTRYIMNYLNIAGDYTETLDQVFKDNSKIERADSTSRSDHDPNEALSPFAAQVIRIMELLETSLDGKAKLYKDVALSNFFMMNNGRYILQKIKASNEMSELLGATWCRKKSSELRNYHKTYQRETWNRVLTCLSHEGLSVNGKVQKPVLKERFKSFNSMFDDIHKTQSSWVVKDEQLQSELRVSISAVVIPAYRAFVGRFSQNLDAGRQTEKYIKYQPEDIETYIDELFEGKQPHEKENKRKGKHNF*	631

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Tpr6g2824	630	SUPERFAMILY	Cullin repeat-like	83	613	IPR016159	-
Tpr6g2824	630	MobiDBLite	consensus disorder prediction	1	37	-	-
Tpr6g2824	630	Pfam	Exo70 exocyst complex subunit	250	610	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
Tpr6g2824	630	PANTHER	EXOCYST SUBUNIT EXO70 FAMILY PROTEIN	25	619	-	-
Tpr6g2824	630	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	25	619	IPR004140	GO:0000145\|GO:0006887
Tpr6g2824	630	Gene3D	Exocyst complex component Exo70	83	622	-	-
Tpr6g2824	630	MobiDBLite	consensus disorder prediction	16	30	-	-
Tpr6g2824	630	MobiDBLite	consensus disorder prediction	154	177	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Tpr6g2824	Tpr-Chr6	30695291	30697676	Dispersed/Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Tpr6g2824	9	614	EXO70 exocyst subunit family	AT5G13990	47.678	0.0	573

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Tpr6g2824	K07195		-	gmx:100820172	827.394

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Tpr6g2824	6	30695291	30697676	Tpr2g0045	2	594664	597456	PCT

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