Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2820 ATGATCAATTCACTTTGTGGAAGCTCAAATTCCCACAAAGAAAAATGTCTTCAGCCCACATCTTCAAATCATACAAATATACACTCAAAGAAAAATACCACAAATTCTAGTGATGATTTAGATCAAATTAATATTCTAACCCCACAAAGCTTAAACCTTCCATCACTCAAATTTGACTTAGATGGTGACGTGGAAGTCCAATCACCAGATAGTTCAATGTGGGAATCATTTTTCAATGACCATTTAGATATTAATAATGACTTTATGATATCTTCACCTATTAGAAATATTAACCCTAACTCACCACAAGCTTCTACTTACAATAATTGTAGTAACTATAACAATAATAATAATAATAATTATGCTCAAGGAATGCAAATTCAAACTTTTTCACCACCTCGTTTTGGAGCATTAAATAGTAGTAATAATATTAATAATCAACAAAAAGGGAAAGGACTTAGTCCACTACATAGAGTTTTTAATTCACCAAATAATCAATATATGCAACATGTTGAAAATCTTTCTTTGCCAGCTATTGAAGAGTTCTTAGAAGATTATCAAGGTGATGTTGATTTTTCAACACCAAAAATCTCTTCTTCTGATCAATGTTTTGATATGGAAACTCCAATTTCAACAATTTTGGATAGTTTATCAATGCAAAATTCATCATCATCAAGGTATTGTGGTTCTATTAGTGAAGAATCTTCTATTTTGCATGGTGGTAATTCTTCTCAAGATAGTGATATTTATCATCAAATGGGATCTATGGCTAGTGCATCACTTTCACAAGCTTTACAACAAGAAAGGTATCAAGAGAAACACCAAAAATTGCAAGCACAACAACAAAGTCTAACAGTTCCTATTCCAATTGGAATTGAACAGGAACAAGACAGTGGACTTCAACTAGTGCACTTGCTTCTAGCTTGTGCTGAAGCAGTAGCAAAAGAAGAATACATGCTAGCAAAAAGGTACCTACATCAGCTCAATAGAGTAGTAACACCACTAGGTGACTCCATGCAACGTGTAGCTTCATGTTTTACAGAATCTCTAAGTGCAAGACTCGCCGCAACCCTAACAACAAAGACATCATCAAACAAAAAGTCAACAACACCATCATCATCCTCCTCCTCCTCATCATCATGTTTCTCTAGCTTCCCATCAAACCCTATGGAAGTTCTCAAGATCTACCAAATCGTTTACCAAGCTTGTCCTTACATCAAATTTGCACACTTTACGGCTAACCAAGCGATTTTTGAGGCATTTGAGGCCGAAGAACGTGTCCATGTTATTGACCTAGATATTCTCCAGGGTTACCAATGGCCTGCTTTTATGCAGGCATTGGCTGCACGGTCCGGTGGTGCTCCGTTTCTTCGGATCACCGGTGTAGGACCGTGCATTGAATCGGTTAGGGAAACTGGACGATGTTTAAATGAGTTAGCTCATTCTCTTCGCATCCCCTTCGAGTTCCACCCAGTTGGAGAACAGCTTGAGGATCTAAAACCGCACATGTTTAACCGTCGTGTAGGCGAGGCATTAGCAGTTAACACTGTTAACCGCCTTCACCGTGTTCCCGGAAATCATCTCGGGAACCTATTGTCCATGATAAGGGACCAGGCACCGAACATAGTGACACTTGTCGAGCAAGAAGCGAGCCATAATGGACCATACTTTTTGGGCCGATTTCTCGAGGCCTTGCATTACTACTCAGCGATTTTCGACTCCTTGGATGCAACTTTTCCAGTGGAGTCGGCACCTAGGGCAAAGGTGGAGCAGTATATATTTGCACCGGAGATTCGGAACATTGTGGCGTGCGAAGGGGAGGAGAGGATAGAGAGGCATGAAAGGTTGGAGAAATGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGAGTGCCTTTAAGTCCTAATGCGGTGACTCAATCAAGGATATTGTTGGGTTTGTATTCATGTGATGGTTATAGGTTAACTGAGGATAAGGGTTGCTTGTTGCTTGGGTGGCAAGACAGAGCCATCATTGCAGCTTCTGCATGGCGATGCTGA 2040 0.399 MINSLCGSSNSHKEKCLQPTSSNHTNIHSKKNTTNSSDDLDQINILTPQSLNLPSLKFDLDGDVEVQSPDSSMWESFFNDHLDINNDFMISSPIRNINPNSPQASTYNNCSNYNNNNNNNYAQGMQIQTFSPPRFGALNSSNNINNQQKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGDVDFSTPKISSSDQCFDMETPISTILDSLSMQNSSSSRYCGSISEESSILHGGNSSQDSDIYHQMGSMASASLSQALQQERYQEKHQKLQAQQQSLTVPIPIGIEQEQDSGLQLVHLLLACAEAVAKEEYMLAKRYLHQLNRVVTPLGDSMQRVASCFTESLSARLAATLTTKTSSNKKSTTPSSSSSSSSSCFSSFPSNPMEVLKIYQIVYQACPYIKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARSGGAPFLRITGVGPCIESVRETGRCLNELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNRLHRVPGNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPVESAPRAKVEQYIFAPEIRNIVACEGEERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLTEDKGCLLLGWQDRAIIAASAWRC* 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2820 679 MobiDBLite consensus disorder prediction 361 381 - -
Tpr6g2820 679 PANTHER GRAS FAMILY PROTEIN RAM1 11 677 - -
Tpr6g2820 679 ProSiteProfiles GRAS family profile. 293 678 IPR005202 -
Tpr6g2820 679 MobiDBLite consensus disorder prediction 1 41 - -
Tpr6g2820 679 Pfam GRAS domain family 302 678 IPR005202 -
Tpr6g2820 679 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 677 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2820 Tpr-Chr6 30643233 30645840 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2820 296 679 GRAS Transcription Factor Family AT1G66350 44.103 1.23e-96 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Tpr6g2820 GRAS 1.3e-129 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2820 - - gmx:100805039 925.235