Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2817 ATGGCAACTGAATCCTCCTGCAGCAGCTCTTCCACTTCCCAACATGAAGATGATAACAAACAAAATCAACTTCCAAACTCTAATTCGAACAAGTCAATTGACTTTGTAAATCTATTAAAAAATGATTTGATTCGTGGGTCTGAAGTGCAAGAGCACAACTTTTTTAGCCCTGTCCAAGTTGGTTCTTCATCTTATTTTCCTAATCACAACAATGAAAAGAATAATTCTAATTCAAAGTCTTATTCATGCTTCTACGGCAAGAGCCAATATTCTTCTTTACGAGCATTAAAAGGACACCAAAATGCTCATAGAACAGAACGTGCAATACAAAAGCAACTAATTCATCAAAGGTACGAAGATGGTTCTTTAGGTTTAGGGCAACTTCCTTTTAACCCTTATTTAAATTATCGTATTACTCCTTTTACACCTTCTCCTATTGAACCTTTTACACCTTATCCTATTACTCCTTTTACACCTTATAGGCCACTTGGGATTAGAATGAAATCATTGATTCAAAAATCACCTTATATTAGCCCTAGGATTGATCATGGTGCTTTATGTTTGCAAGACATATTAAACCCAAATCTTGTTAGCTTGAGAAAAAATATTCAAGGAAGCAATAGTGGGGTTGCAAGTCTAGGTATTGGGGGTGCAACTACTTCAAGAATTGATGATGAAATTGGAAGAAATAATAAAAATGGTGATATTCTAAAACTTGGAAAATCTTCTACAAATATTGTGGCTTCTACATCTACCATGAATGATATTGATAATTCAAAGGCAAATATTGAAGAAGAACTCTCTGATTGTGAATCTTCTACGGTTGATTTGTCACTTAAGCTTTAA 846 0.3416 MATESSCSSSSTSQHEDDNKQNQLPNSNSNKSIDFVNLLKNDLIRGSEVQEHNFFSPVQVGSSSYFPNHNNEKNNSNSKSYSCFYGKSQYSSLRALKGHQNAHRTERAIQKQLIHQRYEDGSLGLGQLPFNPYLNYRITPFTPSPIEPFTPYPITPFTPYRPLGIRMKSLIQKSPYISPRIDHGALCLQDILNPNLVSLRKNIQGSNSGVASLGIGGATTSRIDDEIGRNNKNGDILKLGKSSTNIVASTSTMNDIDNSKANIEEELSDCESSTVDLSLKL* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2817 281 PANTHER ZINC FINGER PROTEIN JAGGED 61 281 IPR045320 GO:0003700
Tpr6g2817 281 MobiDBLite consensus disorder prediction 1 29 - -
Tpr6g2817 281 PANTHER ZINC FINGER PROTEIN KNUCKLES 61 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2817 Tpr-Chr6 30614219 30615064 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2817 68 112 C2H2 Transcription Factor Family AT5G01860 35.556 8.70e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2817 - - mtr:MTR_7g026977 210.69