Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2813 ATGGAAAATTCTAATGAAAATGGTTTCCACAAAAAAATTAATGTAAAGCTAACAAATGAACCAACACTTGTTCAACCATCTGAAGAAACAAAGAAAGGAATGTATTTCTTATCAAACCTTGATCAAAATATTGCTGTAATTGTAAGAACTGTTTATTGTTTCAAAAATGAAGAGAAAGGAAATGAGAATGCTAATGAAGTGATTAAGAATGCATTAAGGGATGTTCTTGTTCATTATTATCCTCTTGCTGGGAGATTAAGTATAAGCTCAGAAGGTAAACTTATTGTAGATTGTACTGGAGAAGGTGCTCTTTTTGTTGAAGCTGAAGCTAATTGTTTAATGGAAGAAATTGGTGATATTACAAAACCTGATCCAAGGACTCTTGGTATGTTGGTTTATGATATTCCTGATGCTAAACATATTCTTCAGATGCCTCCTTTGGTTGCTCAGGTAACCAAGTTTAAATGTGGAGGTTTTTCTCTTGGACTATGCATGAATCACTGTATGTTTGATGGCATTGGAGCTATGGAGTTTGTGAACTCATGGGGAGAACTAGCAAGAGGCCAACCACTCTCAATCCCTCCAATTCTTGACAGAACCATTCTAAAGGCGCGCAATCCGCCAATGATAGAGCATTTGCACCAAGAATTTGCTGACATTGAAGACAAATCAAATACAAGTAGCTTATATGAAGATGAAATGGTGTACAGATCATTCTGTTTTGATCTTGAGAAACTAAAAGAATTGAAGAAAAAAGCTATGGAAGATGAAAATGGTGTTCTTGAATCTTGCACAACATTTGAAGTTCTTTCAGCATTTGTTTGGATAGCTAGAACAAAAGCACTTAAATTGTTGCCAGAACAAGAAACAAAGCTTCTTTTTGCTGTTGATGGAAGGGCTAAATTTGAACCAAAACTTCCAAAAGGGTATTTTGGGAATGGAATTGTACTAACAAAATCGGTTTGTAAAGCAGGTGAAATCACGAACAAGCCCTTTTCGTATACCGTGAAGGCTATTCAAGAAGCAATTAAGAGTGTCACTGATAGTTACATGAGATCAGCTATTGATTATTTTGAGGTAACAAGAGCTAGGCCTTCTTTGGCTTGTACACTTTTGATCACAACTTGGTCGCGGCTTCCGTTTCATACCACTGATTTCGGTTGGGGAGAACCTGTTCTGTCCGGACCAGTTTCGTTGCCTGAGAAGGAAGTGATATTGTTCCTTTCACATGGTCAAGAGAGGAGAAGCATTAATGTGCTTCTTGGTTTGCCTGCTCCTGTCATGAAGATCTTTCAAGATTTGATGATGCAGATATAG 1317 0.3705 MENSNENGFHKKINVKLTNEPTLVQPSEETKKGMYFLSNLDQNIAVIVRTVYCFKNEEKGNENANEVIKNALRDVLVHYYPLAGRLSISSEGKLIVDCTGEGALFVEAEANCLMEEIGDITKPDPRTLGMLVYDIPDAKHILQMPPLVAQVTKFKCGGFSLGLCMNHCMFDGIGAMEFVNSWGELARGQPLSIPPILDRTILKARNPPMIEHLHQEFADIEDKSNTSSLYEDEMVYRSFCFDLEKLKELKKKAMEDENGVLESCTTFEVLSAFVWIARTKALKLLPEQETKLLFAVDGRAKFEPKLPKGYFGNGIVLTKSVCKAGEITNKPFSYTVKAIQEAIKSVTDSYMRSAIDYFEVTRARPSLACTLLITTWSRLPFHTTDFGWGEPVLSGPVSLPEKEVILFLSHGQERRSINVLLGLPAPVMKIFQDLMMQI* 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2813 438 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 15 436 - -
Tpr6g2813 438 Gene3D - 15 216 IPR023213 -
Tpr6g2813 438 Pfam Transferase family 20 434 - -
Tpr6g2813 438 PANTHER OMEGA-HYDROXYPALMITATE O-FERULOYL TRANSFERASE 15 436 - -
Tpr6g2813 438 Gene3D - 217 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2813 Tpr-Chr6 30591052 30593726 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2813 12 438 Monolignol Biosynthesis Gene Families AT5G48930 35.308 4.62e-87 270
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2813 K15400 - gmx:100792433 733.791