Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2807 ATGTTCTCCACACCAACACATTTATACTACTACTGTTACATATTGAACATGAAAATCCTCTCTACCACTACAATCAATGCACCAAATCAAAGTCTTGGCGACTCAACAACTGATCGCAAAATCCATTTGAATCCGTGGGATCTCCAATTCCTCCCTTTTGGAGCCAACCAAACTGCTGGTCTTCTTTATAAACATCCGTTAGAAAAAATTGACACAATAATCCATCAACTCAAATGCTCTCTTTCCTCCACCCTTGCATTTTTCCCACTCTTAGCTGGTCGTCTCGAAATTACGGAACACGAAAATGACAACACTATTTCGTGTTATCTAAAATGTAACAATGCAGGTGTACTGTTTGTCCATGCTGTCGAAAAGAATGTTGCTGTCGCCGACATCCTTCGATCCACATGCCCTCCTCAATTTATCCAATCACTTTTTCCACTTAATGGAATTAAAAACTACGAAGGGACGTCACAACCATTACTTGCGGTCCAAGTAACAGAGCTAATTGACGGCATCTTCCTTGCTTTAACAATCAACCATGTCGTCATTGATGGTAAGCCAACTTGGAATTTCATAAATTCATGGGCTGAAATCTCAAAGTTAAATGGTTGCCTTCAAATATCCAAACAACCAAAACCAACACTTGAACGCTGGTTTCCAAATGCAATTCAACTTCCTATTAGATTTCCTTTCACAATAGAGAAAAACCATGCTGATAATGATGGAAAAGAAAAACTCAACCCACCAGAGAGATTATTCCATTTCACAAAGGAGAAAATCATGGAACTAAAGTCGAAAGCTAACATAGAGGCTGAATCAAACAATATATCTTCCTTACAAGCACTTCTCACTCATATCTGGCGATCTGTGGTTCTTTCCAGAGGATTTGACCCACAAGAAGAAGTTCAATTTATGATAGTAATTGACACACGATCGAGATTTTTCCCACCATTACCAGAGGATTATTTTGGAAATGCGATTATACTTTCTGGGGTTAGCATGAAAGTTGGGGAGCTATTAAAGGAAGGTGGATTAGGAAAGGGTGCTCAGGAGATGAACAAGATGATTGCCTCACACACTAATGAGAAGTTGAAGAATCACTATGAGTCTTGGTTGAAAACACCAAGTTTTATTAGTCTTGGTAGTGTGGCCAATAGTAATTCATTGGTCGTAAGTAGTTCGCCGCGGTTCAATGTTTATGAATGTGATTTTGGATGGGGAAAACCTTTGAGAGTTCGAAGTGGGGATTCAAATAAAAGAAATGGAAAAATTAGTGTGTACCCTGGTGCAGAAGAAGGTAGTGTCGACATTGAAGTTTGTCTTCCTTATGAGATTTTGGAAGCAATGGAAAATGATCCTGAGTTTATGGGTGTCGTGTCCAACTAA 1389 0.3909 MFSTPTHLYYYCYILNMKILSTTTINAPNQSLGDSTTDRKIHLNPWDLQFLPFGANQTAGLLYKHPLEKIDTIIHQLKCSLSSTLAFFPLLAGRLEITEHENDNTISCYLKCNNAGVLFVHAVEKNVAVADILRSTCPPQFIQSLFPLNGIKNYEGTSQPLLAVQVTELIDGIFLALTINHVVIDGKPTWNFINSWAEISKLNGCLQISKQPKPTLERWFPNAIQLPIRFPFTIEKNHADNDGKEKLNPPERLFHFTKEKIMELKSKANIEAESNNISSLQALLTHIWRSVVLSRGFDPQEEVQFMIVIDTRSRFFPPLPEDYFGNAIILSGVSMKVGELLKEGGLGKGAQEMNKMIASHTNEKLKNHYESWLKTPSFISLGSVANSNSLVVSSSPRFNVYECDFGWGKPLRVRSGDSNKRNGKISVYPGAEEGSVDIEVCLPYEILEAMENDPEFMGVVSN* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2807 462 Gene3D - 234 452 IPR023213 -
Tpr6g2807 462 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 17 459 - -
Tpr6g2807 462 Gene3D - 14 228 IPR023213 -
Tpr6g2807 462 Pfam Transferase family 35 457 - -
Tpr6g2807 462 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 17 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2807 Tpr-Chr6 30556855 30558344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2807 77 451 Monolignol Biosynthesis Gene Families AT5G48930 27.320 4.28e-30 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2807 - - gmx:100500257 468.774