Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2801 ATGGATCCCAAAACCTCAAAACAAACACAACTTTCAAACATGGGAGAAAACAAACAACAATCTGATTCAAAAAATCTTCAAATTGTGTTATCTGAAACAAACAACAACAGCAAAGATTCAGAAACAAAGAAACAACTAGCACCAAAAAGAACATCAAACAAAGACAGACACACAAAAGTTGAAGGACGAGGTAGAAGAATAAGGATGCCAGCTTTATGTGCTGCTAGAATCTTTCAACTCACAAGAGAATTAGGTCATAAATCAGATGGTGAAACAATTCAATGGCTTCTTCAACAATCTGAACCATCAATTATAGCTGCAACTGGAACAGGAACAATTCCTGCTTCAGCTTTATCTTCATCTTCAAACACTTTAACAAACCAAGCTTCATCTTTATCTTCTGGTTTACAACTTGATAGAACAAATTGGGCTCAGGCCCATCAACAACAAGCCCAACAACAGGCCCATCAAGCCCATCATGTTAGTTCTTCAAGTTTATGGCCTCATGGATTTGGTTTTCAACAATCATCATCTACTAGTGAAAATAATAGTTCAAATTATTTTCAAAAAATTGGTTTTTCTGGTTTTGATATGCCAACATCAGCAACTAATTTGGGTGGAATGAGTTTTACATCAATTTTGGGTGGAAATCAACAGATGCCTGGTTTGGAATTAGGATTATCACAAGATGGACATATTGGTGTATTGAATCAACAAGCTTTGACTCAGATTTATCAGCAAATTGGTCAAAATCAAAATAGGGTTCAGCAGCAGAATCAGCAGAATCCTACTAAAGATGATTCTCAAAGTTCAGGACAGTAG 822 0.3589 MDPKTSKQTQLSNMGENKQQSDSKNLQIVLSETNNNSKDSETKKQLAPKRTSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQSEPSIIAATGTGTIPASALSSSSNTLTNQASSLSSGLQLDRTNWAQAHQQQAQQQAHQAHHVSSSSLWPHGFGFQQSSSTSENNSSNYFQKIGFSGFDMPTSATNLGGMSFTSILGGNQQMPGLELGLSQDGHIGVLNQQALTQIYQQIGQNQNRVQQQNQQNPTKDDSQSSGQ* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2801 273 MobiDBLite consensus disorder prediction 1 67 - -
Tpr6g2801 273 MobiDBLite consensus disorder prediction 37 66 - -
Tpr6g2801 273 MobiDBLite consensus disorder prediction 1 36 - -
Tpr6g2801 273 MobiDBLite consensus disorder prediction 251 273 - -
Tpr6g2801 273 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 1 272 IPR005333 GO:0003700
Tpr6g2801 273 Pfam TCP family transcription factor 51 160 IPR017887 -
Tpr6g2801 273 ProSiteProfiles TCP domain profile. 53 107 IPR017887 -
Tpr6g2801 273 PANTHER TRANSCRIPTION FACTOR TCP20-LIKE 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2801 Tpr-Chr6 30486269 30487793 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2801 18 273 TCP Transcription Factor Family AT3G27010 51.986 4.80e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Tpr6g2801 TCP 4.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2801 - - cit:102618103 284.648