Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2800 ATGGCTGAGATATCTGTTGACAGATTTGCAAACAAAATCACATCATCATCATTCATCAAAGACCCTGAAACTCTAATCTCCAAAGATGGTAACTTTACCTTTGGATTCTTTAGCCCAACAAATTCTTCTACAAACCGCTACGTCGGAATTTGGTGGAAGTCTCAACTCACAAATATATGGGTGGCTAACAGAAAACATCCACTGAATGATTCTAATGGGATTGTCACAATATCTGATGATGGAAATCTTGTGGTATTGAATGGACAGAAACAAGTAATTTGGTCATCAAATGTTTCCAACATAGAGTCGAATAATACTAGTGTACATGGCTATATGTCTCCTGAATACGCAATGCATGGACATTTTTCAGAGAAATCAGATGTTTTTAGCTTTGGTGTTTTGTTACTTGAGATCATTATTGGTAGAAGAAACTCAAGCTTTTATGGCAATGAGCATGCTCTGAGTCTTTTAGGATTTGTCTGGATTCAATGGAGGGAAGACAATATTTTATCTTTAATAGATCCAGAAATATATGATCATAATGATCATAAGAATATTTTGATATGCATACATATAGGACTTTTATGTGTACAAGAATCAGCTGTAGACAGACCTACTATGGCTACAGTAATTTCTATGCTCAATAGTGAGGTTGCATCTCTTCCTCCTCCAACTGAACCTGCATTCATCCTGAGGCAGAATATGTCGAATTCAAAGTCGACTGAAGAAAATCAAAGCGTGTGTTCCATTAATAATGTCAGTATTACAGACGTATGTGGCAGATAG 786 0.3613 MAEISVDRFANKITSSSFIKDPETLISKDGNFTFGFFSPTNSSTNRYVGIWWKSQLTNIWVANRKHPLNDSNGIVTISDDGNLVVLNGQKQVIWSSNVSNIESNNTSVHGYMSPEYAMHGHFSEKSDVFSFGVLLLEIIIGRRNSSFYGNEHALSLLGFVWIQWREDNILSLIDPEIYDHNDHKNILICIHIGLLCVQESAVDRPTMATVISMLNSEVASLPPPTEPAFILRQNMSNSKSTEENQSVCSINNVSITDVCGR* 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2800 261 Pfam D-mannose binding lectin 57 107 IPR001480 -
Tpr6g2800 261 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 8 101 - -
Tpr6g2800 261 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-KINASE 108 258 - -
Tpr6g2800 261 ProSiteProfiles Bulb-type lectin domain profile. 10 131 IPR001480 -
Tpr6g2800 261 Gene3D Transferase(Phosphotransferase) domain 1 56 221 - -
Tpr6g2800 261 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 8 101 - -
Tpr6g2800 261 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 108 258 - -
Tpr6g2800 261 SMART blect_4 16 134 IPR001480 -
Tpr6g2800 261 Pfam Protein tyrosine and serine/threonine kinase 100 212 IPR001245 GO:0004672|GO:0006468
Tpr6g2800 261 CDD B_lectin 16 104 IPR001480 -
Tpr6g2800 261 SUPERFAMILY Protein kinase-like (PK-like) 70 246 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2800 Tpr-Chr6 30465121 30469909 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2800 106 261 Receptor kinase-like Gene Family AT4G21410 53.125 8.36e-44 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g2800 PK_Tyr_Ser-Thr 9.7e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2800 - - cam:101513672 251.906