Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2796 ATGGAGAATAATTATTCCATGTTGTTTCCTTGTCCTCCTTCTTCTAGCTACCAAATTCCAATTACAAGTGGTTTGAATGGTCAAAGTTCAAATGCATTTCTTGGTTTGAAGGCTAATAATAATGATCAAATTATTAGTGTTAATCATGATCATGATGAAGATGAAAAGAGAGATGAAGGGAGTATTAATGTTGTTAATGATCAACAAGGTGTTAAAAAGAAAGGAGAGAAAAAAGCTAAGAAGCCTAAATATGCTTTTCAAACTAGAAGTCAAGTTGATATACTTGATGATGGTTATAGATGGAGAAAATATGGACAAAAAGCTGTTAAAAACAACAAATTTCCCAGGAGCTATTATAGGTGCACACATCAAGGATGCAATGTAAAGAAACAAGTTCAACGCTTAACCAAAGACGAGGGAGTAGTTGTGACAACTTATGAAGGAGTGCATACTCACCCTATTGAGAAGACAACCGATAACTTTGAGCATATTTTGAGTCAGATGCAAATATACACTCCCTTTTGA 525 0.341 MENNYSMLFPCPPSSSYQIPITSGLNGQSSNAFLGLKANNNDQIISVNHDHDEDEKRDEGSINVVNDQQGVKKKGEKKAKKPKYAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMQIYTPF* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2796 174 PANTHER WRKY TRANSCRIPTION FACTOR 75-RELATED 29 170 - -
Tpr6g2796 174 ProSiteProfiles WRKY domain profile. 90 155 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g2796 174 Pfam WRKY DNA -binding domain 96 153 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g2796 174 Gene3D WRKY domain 81 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
Tpr6g2796 174 SMART WRKY_cls 95 154 IPR003657 GO:0003700|GO:0006355|GO:0043565
Tpr6g2796 174 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 29 170 IPR044810 GO:0003700
Tpr6g2796 174 SUPERFAMILY WRKY DNA-binding domain 87 154 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2796 Tpr-Chr6 30408058 30411713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2796 83 174 WRKY Transcription Factor Family AT5G13080 86.957 2.49e-58 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Tpr6g2796 WRKY 1.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2796 - - ccaj:109792402 248.44