Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2786 ATGGGTTCTTCATCAACTTTTGGTGCTTCTCAGTCAAACTCAAAACATGATGTTTTTCTCAACTTTAGAGGGGAAGATACTCGATGCAATTTTACAAGCCATCTTTATGCTGCCTTGGTTAGAAAAAATGTCCACACATTCATTGATGACGAGGAAATTGAGAGAGGAGATAGTATCTCACCGACGCTTTTTTCAGCTATCGAAAGCTCAAAGATTTGCGTAACAATTTTCTCGCAGGATTATGCTTCTTCTGCATGGTGTTTAGATGAACTTGCGAAGATCATTGAATGCAATGAGAACAAAAAACTTATTGTCATACCTGTTTTCTATCATATTGACCCATCTCATGTAAGACACCAGAGGGGAACTTATGAAGATGCATTTACCAAACACGAACAGCGTTTCAAGGATAATCTATTCAAGGTACAAAAGTGGAGAACTGCTCTGCATCAAGCAGCCAACTCAGCAGGATGGGATTCCTCAAATATTAGGCTGGAGGCTGACCTAGTGGAAAAAATTGTTGAAGATATATTAGATAAGTTGAAATGTATAAGCCCACATGTTCCAAAGAAGGGGCTTGTAGGAATTACTCGACACATGGCACATGTCGAATCATTGTTATGCACTGGATCAGCTGATGTACGGATTATTGGTATTTGGGGTATGGGTGGTATAGGCAAGACAACCATTGCAGAGGCTATATATACAAAAGTCTCTTCTCAATACGACGGATGCTACTTCGCTGCCAATGTGAGGGAAAAATGGAAATATTCTAGAGAAAACGAGTTACGGACTAAACTTCTGGCTGGTGTATTAGGGAACCAAAACTTGGATATTAGCACCCCTACTATAAGTTCCACTTTTGTTGTAGGAAGGCTTCAATGTAAAAAGCTTCTCATTGTTCTCGATGACATAAGTGATTCCAAACAAATAGAATATCTTGTTGGCGAGAAAGATTGGTTTGGACCTGGTAGTCGAATCATAGTGACGACCAGAAATAAAGAAGTGTTTAACAGTGGTGTTGATGAATTATACCAAGTGAAGGTATTGAATTCTCATGAATCACTAAAGCTTTTTAGCTTGAAGGCCTTTCAACAAGACCATCCAATGAGGGAATACCAACACTTGTCAGACAGGGCAGTAGATTATGCTAAGGGCAATCCTCTTGCTCTTAAAGTTCTGGGTTCCAATCTTTGTGCCAAACGACCAAAAGAATGGGAGAGTGCACTGGAGAAACTGAAGAAAATTCCCAAGGCTGAAATTTATGATGTGTTAAGATTGAGTTATGAAGGATTAGACCCAGAAGAGCAGAATATATTTTTAGATATTGCCTGCTGTTTGAAAGGAAAAACGAAATGCAGTATAACAAGAATATTAGACGGCTGCGGTTTTTCTACCGAAATTGGGATGAGAAGCCTTGAAGATAAGTCTCTTGTAACCATTTCCAATGGCAACGAGGTAGAGGTGCATGATCTGATACAAGAGATGGGTTGGCAAATAGTTCGTGAAGAATCTATGAAAGAGCCTGGAAAACGAAGTCGATTGTGGGATCCTAAAGAAATTTATGATGTCCTCAAGTACAACACGGGTACTGACAGTATTGAGAGCATAGTGTTGGACATGTCTCAAATCAAAGAAGTGACATTAAGGCCTCAAACTTTTGACAGAATGTACAAGATAAGGCTTTTGAATTTTCATGTTCCTTCACATGGTAAGAGAAGAACCAATGTGCATTTTTCCAGAAGTCTTGAGTGTTTGCCGGATGAATTGAGTTATCTCCGATGGGACTTTTTCCCATTGAAATCCTTGCCTCCATCGTTTTGTGCAGAGAAGCTTGTTGAACTTGATCTAAAACATAGCCTTGTTGAAAAGCTATGGAATGGAGTGCAGGATCTTGTGAATTTGAAGTTATTGAACCTTGGTGGTTGCAAGCACCTGATTGAGCTCCCAGATATGTCTTTGGCTTCAAAGCTTGAAGAAGTGCATCTTGATGATTGTACAAGTTTGTTGCATGTTCCTTCATCCATTTTGTCACTTGATAGTCTTTTTGCACTAAATCTGAGAGGCTGTAAAGAGCTTCGTTACATTCAAAGTGAGAAGCAGTCTAGATCTCTTACATGGCTCAATCTCAGAGGATGCTCAAGACTTGTAAAATATTCAGTTATTTCAGAGAAATTGGACTCTTTGAACTTAGATGACACGGCAATTGAAGAACTGCCTTCATTAGTTATTGGTTTAGATTGTAGCATCCAGCTTCTCGACTGCCCAAAACTTGAGAAATTACCTGCAACATTTGATTCCTCACTGTCCATTACTTCGCTCCGTCTAGATAATTGTTTAAATTTATCAAAACTCCCTGACAACCTCGGCCTCTTGTCAAAATTAAATAAACTATCATTAAGAGGAAGCAATATTGAGAACTTGCCTGGTAGCATAAAATATCTTTCGCAGTTGAGAGATCTCAATGTGAGCAACTGTAGGAAGCTCCGTTCCTTGCCCGAGCTTCCATTCTTTTTACAAGACTTGAATGCAAGTAATTGCATTTCCCTAGAAATAGTATCCAACTTAGGGATCACAGTTTTGAAAGATTCATTTGACAAGCAGAAGAAGTTATCATTTTTCAGACAGATTCAGGAGAAAGAAAAAATGTCTATTCGTCATCGTGAGTATTTCGGAAGATTTGAGTTCTATAATTGCATGAAATTGAATCAGATTGCGTGCCAGGCTATTATGGAAGAAGCTGTGATTATAATTCAGCTAGCAGCCAGCCTATCCTCAACGATTGATGATTGTAATGATCCTTACAGTCAAACCGGGGAAATTTCTAAGAATTTTGACCCTGAAGATTTGGTATATATTTCCCGTCCGGTTTATATTATTTTACCAGGAAATGAAGTCCCAGATTGGTTCACACTTAAAAGTACAGACTCCTCTAGCATAACAACTGAACTTTCTTCATTGGGTTTTGCTTTCTGCCTTGTTGCTGGACCATCTGACTCAAACAGGAAGAAAATTTGTCGTACTGGTTATGTGGCAGGGTGTAGATGCTATGTTGGGGGAAATTATGCTGGAACATGCATTATAAAGTCTTCTTCTACTGATTCCAAATCAGATCAGGTATGGCTGTGGTATGACCAGATTTTAAACGTTGTAAATGGGAGCGGTTCTTCAGATAAGATCTCCTTTGAGTTTTTTGTCCGGCCTGGTAGTTCAGGACTTGTTGTGAAACATTGCGGAGTTCGACCATTGTATGCTCCGTTAGACACTATGCAATGTTCAAGCGAAGAAGTTATCCGAGAAGGTAAGAGAGCATATCAGGAGTTTGAAGGCAACAAAACTCCAACCAGTTATGCCCTTATTCGCCAATATGCTGTTCCTCGTGACAAGGGACTTGAATTGTCATTAAAAGAAAGGATTTCAGGGTATCCCGAAGGACAATTTGGGAAATCCATCCCATCAATTTCTTGTGCCACAAATGTTGTTGAACTTCAAATGCAACACAACTGCTATGGTAATTGTGCCGAAGTAATTGTTAGTTTTGGCCTTGTTGGTAGAAGTTCCCAGCCACTGCATGATCTGCGGTATTTAGCACGACAAATTCAGGATTACTATTGTTATTTTGGTGAACTTGTAAACAATATCAACGTCTTTTCATCTCTAAGGAGATTGTCTCTATATGATTGTAATATTGAAAGCTTGCCTGCTAGCATCAAGCATCTTTCATGTCTGGAATATCTTTCATTGAAGAACTGCAAGAGGCTTACGTCTCTCCCCAATCTTGTACCATCCCTTACGAGATTGTATGTTGTTGAGTGCACATCTCTGGAGACAGTTGAATTTGTTGAGGAAAACACCATGATTTTTCCAATATCCAATGAAATGGTTACCTATAACAAAGTATCGAGAATACAAGTTACTGAACCAAGAGCAAGTGTCAGAGACTGGTACATGGAAATGTCAATGTCAATGTCAAGGCCAGGAGATCCAATGTATATTGCGTTCAATGTTGGTCCAAGAACAACCAAGTCACTGAATTTGATGTGCGTAGGTGATACGGTAAAAGTTACTATTGAAATTAGGGAATTTAGGTTACAATATTTACATTATTTACATTAA 4116 0.3902 MGSSSTFGASQSNSKHDVFLNFRGEDTRCNFTSHLYAALVRKNVHTFIDDEEIERGDSISPTLFSAIESSKICVTIFSQDYASSAWCLDELAKIIECNENKKLIVIPVFYHIDPSHVRHQRGTYEDAFTKHEQRFKDNLFKVQKWRTALHQAANSAGWDSSNIRLEADLVEKIVEDILDKLKCISPHVPKKGLVGITRHMAHVESLLCTGSADVRIIGIWGMGGIGKTTIAEAIYTKVSSQYDGCYFAANVREKWKYSRENELRTKLLAGVLGNQNLDISTPTISSTFVVGRLQCKKLLIVLDDISDSKQIEYLVGEKDWFGPGSRIIVTTRNKEVFNSGVDELYQVKVLNSHESLKLFSLKAFQQDHPMREYQHLSDRAVDYAKGNPLALKVLGSNLCAKRPKEWESALEKLKKIPKAEIYDVLRLSYEGLDPEEQNIFLDIACCLKGKTKCSITRILDGCGFSTEIGMRSLEDKSLVTISNGNEVEVHDLIQEMGWQIVREESMKEPGKRSRLWDPKEIYDVLKYNTGTDSIESIVLDMSQIKEVTLRPQTFDRMYKIRLLNFHVPSHGKRRTNVHFSRSLECLPDELSYLRWDFFPLKSLPPSFCAEKLVELDLKHSLVEKLWNGVQDLVNLKLLNLGGCKHLIELPDMSLASKLEEVHLDDCTSLLHVPSSILSLDSLFALNLRGCKELRYIQSEKQSRSLTWLNLRGCSRLVKYSVISEKLDSLNLDDTAIEELPSLVIGLDCSIQLLDCPKLEKLPATFDSSLSITSLRLDNCLNLSKLPDNLGLLSKLNKLSLRGSNIENLPGSIKYLSQLRDLNVSNCRKLRSLPELPFFLQDLNASNCISLEIVSNLGITVLKDSFDKQKKLSFFRQIQEKEKMSIRHREYFGRFEFYNCMKLNQIACQAIMEEAVIIIQLAASLSSTIDDCNDPYSQTGEISKNFDPEDLVYISRPVYIILPGNEVPDWFTLKSTDSSSITTELSSLGFAFCLVAGPSDSNRKKICRTGYVAGCRCYVGGNYAGTCIIKSSSTDSKSDQVWLWYDQILNVVNGSGSSDKISFEFFVRPGSSGLVVKHCGVRPLYAPLDTMQCSSEEVIREGKRAYQEFEGNKTPTSYALIRQYAVPRDKGLELSLKERISGYPEGQFGKSIPSISCATNVVELQMQHNCYGNCAEVIVSFGLVGRSSQPLHDLRYLARQIQDYYCYFGELVNNINVFSSLRRLSLYDCNIESLPASIKHLSCLEYLSLKNCKRLTSLPNLVPSLTRLYVVECTSLETVEFVEENTMIFPISNEMVTYNKVSRIQVTEPRASVRDWYMEMSMSMSRPGDPMYIAFNVGPRTTKSLNLMCVGDTVKVTIEIREFRLQYLHYLH* 1372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2786 1371 Pfam NB-ARC domain 199 415 IPR002182 GO:0043531
Tpr6g2786 1371 SUPERFAMILY L domain-like 489 853 - -
Tpr6g2786 1371 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 443 IPR027417 -
Tpr6g2786 1371 ProSiteProfiles TIR domain profile. 14 181 IPR000157 GO:0007165
Tpr6g2786 1371 Gene3D - 349 433 IPR042197 -
Tpr6g2786 1371 SMART till_3 15 155 IPR000157 GO:0007165
Tpr6g2786 1371 Gene3D Ribonuclease Inhibitor 722 927 IPR032675 -
Tpr6g2786 1371 Pfam C-JID domain 961 1085 IPR045344 -
Tpr6g2786 1371 Gene3D Ribonuclease Inhibitor 1134 1291 IPR032675 -
Tpr6g2786 1371 Gene3D Ribonuclease Inhibitor 527 721 IPR032675 -
Tpr6g2786 1371 Pfam TIR domain 15 187 IPR000157 GO:0007165
Tpr6g2786 1371 Gene3D - 183 343 IPR027417 -
Tpr6g2786 1371 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 10 866 IPR044974 GO:0006952
Tpr6g2786 1371 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 10 866 - -
Tpr6g2786 1371 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 158 IPR035897 -
Tpr6g2786 1371 SUPERFAMILY L domain-like 1187 1280 - -
Tpr6g2786 1371 Gene3D - 13 182 IPR035897 -
Tpr6g2786 1371 PRINTS Disease resistance protein signature 216 231 - -
Tpr6g2786 1371 PRINTS Disease resistance protein signature 292 306 - -
Tpr6g2786 1371 PRINTS Disease resistance protein signature 384 398 - -
Tpr6g2786 1371 PRINTS Disease resistance protein signature 630 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2786 Tpr-Chr6 30318971 30327852 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2786 12 828 WRKY Transcription Factor Family AT4G12020 34.138 3.19e-123 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2786 - - mtr:MTR_1g052170 1466.44