Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2779 ATGGGTTCCTTAAAAGAGAAACTAAAATCACTATACAAAAGTAGATGGTTTGTATTTGTTGGAGCAATGTGGTTACAATCATGGGCTGGTATTGGATATTTATTTGGAAGTATATCACCAGTTATAAAAAGATCATTAAATTATAATCAAAAACAACTTGCGATGTTAGGTGTTGCTAAAGACCTTGGTGATTGTGTTGGTTTTGTTACTGGTGTTTTGTGTGAAATTTTACCTATTTGGGCTGCTTTACTTGTTGGTGCTTCTTTGAATCTTGTTGGTTATGGTTGGGTTTGGTTAATTGTTACAAGTAAAGTTCCTACTCTTCCTTTATGGGCTATGTGTATTCTTATATTTGTGGGAACAAATGGCGAAACCTACTTCAACACAGTTTCATTGGTGTCTTGTGTACAAAATTTCCCAAAAAGCCGCGGTCCTGTCGTCGGAATTCTAAAGGGCTTCGCTGGATTGAGTGGTGCAATATTGACACAAATATATGCACTCATCCATTCCCCTGATCATGCATCATTGATATTTATGGTTGCGGTTGGTCCATCATTGGTAGCAATAGGTCTTATGTTCATTGTTAGACCTGTCGGAGGCCACAAACAAGTGCGTCCTTCAGACGGAAAATCGTTCACATTTGTTTACGGTGTATGCCTCCTTTTGGCGGCTTATTTGTTGGGAGTTATGGTTGTTCAAGATTTAGTTGATCTGAGTGAAACTGTTATCTCAATTTTTACGATCATCCTCTTTCTGATCCTCCTTGTTCCGATTGTAATTCCTTTGTCGTTGACTTTCGGGACTGCCGAAAAGTCTCTAGAGGAAGAAGCACTTCTTCCAGAACCAGAAGGACAATCACAACATTATTCTGATGAAGTAATATTGAGTGAGCTGGAAGATGAGAAACCGAAGGAAGTGGACTTGCTACCTGCATTGGAAAGGCAGAAGCGTATAGCGCAATTACAATCGAGATTACTACAAGCTGCTGCAGAAGGAGCTGTTAGGGTTAAGAGGAGGAGAGGACCACACAGAGGAGAAGATTTTACCTTGATGCAAGCTTTGATTAAAGCAGATTTTTGGCTTCTTTTCATTTCCATGGTTTTAGGTTCTGGATCTGGGTTGACTGTAATTGACAATCTTGGTCAGATGAGCCAGTCATTAGGATATGAAAATGCACATATATTCGTCTCCATGATCAGTATTTGGAACTTTCTTGGACGTGTCGGAGGGGGCTACATATCTGAGATTGTTGTCAAGGATCATACATATCCAAGACCAGCTGCATTAGCTGTATTTCAACTAGTTATGACTATTGGTCATCTTTCCATCGGTATGGGATGGCCAGGTTCAATGTACATCGGCACTTTACTAGTTGGACTTGGTTATGGTGCTCATTGGGCAGTTGTTCCAGCTACAGCTTCTGAATTATTCGGTTTAAGAAACTTTGGTGCATTATACAATTTCATCACACTAGCAAACCCTATTGGAACTCTTGTCTTCTCTAGTCTCATTGCTAGCCGAATCTATGATCGTGAAGCGGAGAAACAAGCTCATGGTGGCCACCACCTTAATATAGGATCGTTTGTATCTCACGCGCTTAATGTTGGTGAGCAGCTAAAGTGTGAAGGTTCCATATGCTTCTTCCTGACTTCATCTATCATGGCAGGATTTTGCATTGTTGCAGCAGGTTTAAGCATGTTTCTTGTCTTCCGAACAAGGATTGTTTATGCTCATTTATATGGAAAGTCTTCTATGAGAAACCTTCGATGA 1770 0.4023 MGSLKEKLKSLYKSRWFVFVGAMWLQSWAGIGYLFGSISPVIKRSLNYNQKQLAMLGVAKDLGDCVGFVTGVLCEILPIWAALLVGASLNLVGYGWVWLIVTSKVPTLPLWAMCILIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYALIHSPDHASLIFMVAVGPSLVAIGLMFIVRPVGGHKQVRPSDGKSFTFVYGVCLLLAAYLLGVMVVQDLVDLSETVISIFTIILFLILLVPIVIPLSLTFGTAEKSLEEEALLPEPEGQSQHYSDEVILSELEDEKPKEVDLLPALERQKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLMQALIKADFWLLFISMVLGSGSGLTVIDNLGQMSQSLGYENAHIFVSMISIWNFLGRVGGGYISEIVVKDHTYPRPAALAVFQLVMTIGHLSIGMGWPGSMYIGTLLVGLGYGAHWAVVPATASELFGLRNFGALYNFITLANPIGTLVFSSLIASRIYDREAEKQAHGGHHLNIGSFVSHALNVGEQLKCEGSICFFLTSSIMAGFCIVAAGLSMFLVFRTRIVYAHLYGKSSMRNLR* 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2779 589 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 3 583 - -
Tpr6g2779 589 Gene3D MFS general substrate transporter like domains 327 533 IPR036259 -
Tpr6g2779 589 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 583 - -
Tpr6g2779 589 CDD MFS_Mch1p_like 14 562 - -
Tpr6g2779 589 SUPERFAMILY MFS general substrate transporter 5 201 IPR036259 -
Tpr6g2779 589 Pfam Nodulin-like 15 262 IPR010658 -
Tpr6g2779 589 SUPERFAMILY MFS general substrate transporter 213 573 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2779 Tpr-Chr6 30277525 30282943 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2779 3 583 Nodulin-like Gene Family AT5G14120 69.402 0.0 814
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2779 - - aprc:113861924 984.556