Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2778 ATGGGAACTATAAGAATTATTTTTATGGCTTTGGTTATGGCTCTTAAGATTTTATCTAGTGAAGGCCAATTAGTAGAGAATTTCTACACTTCAAGTTGTCCTAATGTTGAACTTTTGGTGTCTCAAGCAGTGACCAATAAATTTACTCAGACTATCACCACTGGACAAGCAACTCTTCGTTTATTTTTGCATGATTGCTTTGTTGAGGGATGTGATGCTTCGGTTATAATAGCCTCACCAAATGGGGATGCAGAAAAAGATGCAAAGGAAAATCTTTCTCTACCAGGAGATGGGTTTGACACTGTGATTAAAGCAAAAGAAGCAGTTGAAGCTGTATGCCCAGGAGTGGTTTCTTGTGCAGACATTTTAGCACTTGCCACTAGAGACGTTATAGTCTTGCTTGGAGGCCCTTCATTCACAGTTGAACTAGGACGAAGAGATGGACTCAATTCCAAAGCATCAAATGTTGAACCAAATCTACCAAAACACAGTTTCAATCTCAATCAACTAAACAAAATTTTCTCAAAACACAACCTAAGCCAAACCGACATGATTGCACTTTCAGGAGCACACACCGTTGGATTCTCACATTGTGACCAATTCACTGACCGTATATTTTCATCTCCAGTGGACCCCACATTAGACCCAACTTATGCACAACAATTAATAGTAGATTGTCCTAAAAATGCTGACCCAGGCACAGTCATAGCTCTTGATCTTCAAACACAACATGTTTTTGATAATTTGTATTATCAAAATTTAGTTAATGGTAAAGGGTTGTTAAGTTCTGATCAAGTTTTGTTCACTGATGATGCTTCAAAATCTACGGTTGTTGATTTTGCTAATGATGGTGCTAAATTCTTTGATGCTTTTGTTGTGGCTATTAAGAAGCTTGGAAGAGTTGGGGTAAAGACCGGTCAAGAGGGAGAGATTAGGAGAGATTGTAGTAAATTTAATTAG 960 0.3792 MGTIRIIFMALVMALKILSSEGQLVENFYTSSCPNVELLVSQAVTNKFTQTITTGQATLRLFLHDCFVEGCDASVIIASPNGDAEKDAKENLSLPGDGFDTVIKAKEAVEAVCPGVVSCADILALATRDVIVLLGGPSFTVELGRRDGLNSKASNVEPNLPKHSFNLNQLNKIFSKHNLSQTDMIALSGAHTVGFSHCDQFTDRIFSSPVDPTLDPTYAQQLIVDCPKNADPGTVIALDLQTQHVFDNLYYQNLVNGKGLLSSDQVLFTDDASKSTVVDFANDGAKFFDAFVVAIKKLGRVGVKTGQEGEIRRDCSKFN* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2778 319 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Haem peroxidase superfamily signature 239 254 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 ProSiteProfiles Plant heme peroxidase family profile. 23 319 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 SUPERFAMILY Heme-dependent peroxidases 23 319 IPR010255 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 Gene3D Peroxidase, domain 2 161 298 - -
Tpr6g2778 319 Pfam Peroxidase 41 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 CDD secretory_peroxidase 23 318 IPR033905 GO:0004601|GO:0042744
Tpr6g2778 319 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 237 252 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 253 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PRINTS Plant peroxidase signature 293 306 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 Gene3D - 27 319 - -
Tpr6g2778 319 PANTHER - 10 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Tpr6g2778 319 PANTHER PEROXIDASE 55 10 319 - -
Tpr6g2778 319 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2778 Tpr-Chr6 30250501 30254390 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2778 4 319 Peroxidase AT5G14130 61.250 1.18e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2778 K00430 - gmx:100791275 479.559