Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2777 ATGGATGTTGAAAATCAGAATCCGGATTCAGAGTTTCCGTTCTGGAAACCCATTCCTCGTAGATTCCAACCCGATTCCCCTTTCTTCGCTATCGGTAACCTCGAACGAGAACTTCTTGTTAAACAGGTTGCTTTGGAATTAACTGAAGAGAAGGAACAGCTAGAGGATTTCATACAAGAAGATGGAAGGGAAGTCTTCTGTCCCATTGTTGGGTGTGGAGCGCGTTTGGCTTCAATGGAGGACTTTGAAAATCACTATAATGCAAGACATACTGCATCCTGTTCTGTGTGTTTTAGAGTCTACCCAACATCACGTTTGCTTAGCATTCATGTATCGGAAGCTCATGATTCGTTCTTTCAGGCAAAAGTTGCACGTGGCTATGACATGTATGAATGCTTAGTGGAAGGTTGTGGTTTGAAATTCAAAAGCTACAAAAGTAGGCATCAGCATCTGGTCGACAAGCATAAATTCCCTACATCATTCGAGTTTTTCAAGAAGGCTCTGCCTTCAAAGAAACACAGGATGAAGTCTCAACGCAAAAAACCTTCTCATTCTCATAAGGAGGATACTTCAGGAATGATGGAAGTGGAAAATGCAGCCATAGATGACCTTGTTTCAGCAGTCTCTAAATTGAATACTTCTGACTCAACTCCTTCATCTATCAGCTTTGGTCGCCGTAACCCCAAAGGCATGACATTTGTCCCACGAGCTGTTCAGCATGGGAAGGGATCAAACTCAGATTCATCCGTTACAAAGAGATAA 762 0.4252 MDVENQNPDSEFPFWKPIPRRFQPDSPFFAIGNLERELLVKQVALELTEEKEQLEDFIQEDGREVFCPIVGCGARLASMEDFENHYNARHTASCSVCFRVYPTSRLLSIHVSEAHDSFFQAKVARGYDMYECLVEGCGLKFKSYKSRHQHLVDKHKFPTSFEFFKKALPSKKHRMKSQRKKPSHSHKEDTSGMMEVENAAIDDLVSAVSKLNTSDSTPSSISFGRRNPKGMTFVPRAVQHGKGSNSDSSVTKR* 254
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2777 253 MobiDBLite consensus disorder prediction 211 253 - -
Tpr6g2777 253 ProSitePatterns Zinc finger C2H2 type domain signature. 132 155 IPR013087 -
Tpr6g2777 253 MobiDBLite consensus disorder prediction 211 226 - -
Tpr6g2777 253 PANTHER ZINC FINGER PROTEIN 511 9 242 - -
Tpr6g2777 253 ProSitePatterns Zinc finger C2H2 type domain signature. 67 90 IPR013087 -
Tpr6g2777 253 SMART c2h2final6 92 115 IPR013087 -
Tpr6g2777 253 SMART c2h2final6 130 155 IPR013087 -
Tpr6g2777 253 SMART c2h2final6 65 90 IPR013087 -
Tpr6g2777 253 PANTHER UNCHARACTERIZED 9 242 IPR039258 -
Tpr6g2777 253 Coils Coil 40 60 - -
Tpr6g2777 253 MobiDBLite consensus disorder prediction 170 193 - -
Tpr6g2777 253 MobiDBLite consensus disorder prediction 239 253 - -
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2777 12 249 C2H2 Transcription Factor Family AT5G14140 65.714 9.01e-114 325
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Tpr6g2777 None None None
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2777 - - gmx:100819557 407.912