Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2753 ATGGGCACAGTAGAAATGATGATTACATTCCACATGAAAACTTTGGTCTTTTTTCTTTGCCTCTTTCTCTCTTCATTTGGTGAAAACTTGTTAACTTGTGAGACAACATCACCACATGATTCTATCTACCATTGCAATGAAAATGAGTCACAAAATCATCATTGTGAAACATTTGCACTCTTTTTCACAAACTCTCACTATTCCTCTCTCTCAAACCTTACCTTATACTTAGGACTCAACAAGTTTATCATAGCAGAAACAAATGGTTTCTCTGCAGAAACTGAGTTTCTTCCATATAATCACCCTCTTCTTGTACCTATTGATTGCAAATGCAAAAAAAGTGGTTTTTTTCAAGCTGAGTTAACAAAAACTACTATCAAAGGTGAAAACTTTTATGATATTTCTCAATCACTTGAAGGCTTAACAACTTGCAAAGGTATCAAAGATAGCAACATTGGTGTCTCACCTTGGAACCTTGATTCTAAACTCAAATTGATTGTTCCTTTGAAATGTGCTTGCCCTTTTTCTTCTTTTGTTATACCAAAACCAAAATTTCTTCTTTCTTATCCTCTAAGTCAAAATGATACAATTTCAAATTTGGCCTTAAAGTTCAATATTTCAAAGGAAGCTATTGTTAGTGCCAATAACTTTTCATCATCATCATCATCATCAGAAGAGGAAATTCTTAGAACAAGAAGCTTAGAACCATTTACCTCTATTCTAATTCCATTGAATGAGAAACCTTTTCTTTTTCTTGATCCCTTAGCTAAGCCAAGACAACCCAATTCAGATTTTCCAAGAACAAACAATATTTCAATAAATAGTCCACACAAGAAATCAAGAATGAGAAAGAGTGAGGTTTATATTGGCCTAATTGGTGTTGCAATCGGTGTTTTCTTTGCTTTAGTTGTTGCTTTTTTCTTTATGTGGTTGAAGCAAAAGAAGGTGGAAGAAAATTCATGCAAAGAAAGAGATTTGGAGCTACAACATCTAAATCTAAGTGTGAGAACTACAAGTGATAAGAAAGTTTCATTTGAAGGGTCACAAGATACACTTGAGAGTAAAATCATCGATGCAACGACTCCGCGTAAGATGTTGCTTGAGACATACACAATTGAAGATTTGAGAAAAGCAACTGAGGATTTCAGTTCAAATTGTCACATTGATGGATCAGTTTTTCACGGTTGTTTAAATGGAAAAAATTTGGCAATCAAAAGAATAAAAACCGAAATGGTGTCGAAATTAAATCTTGGCCTTTTTCATGATGCAAATCATCATCATCCAAACATAATCAACCTCCTTGGAACAAGTATTTCAGAAGGGTCATCAGATTCAGAATCCTTTTTGGTTTTTGAGTATGCTAAAAATGGTTCATTGAAAGATTGGCTTCATGGTGGCTTGGCCATCAAGAATCAATTCATAGCTTCTTGCTATTGTTTCTTGAATTGGGATCAACGGCTTCGGATTTGTCTTGATGTGGCTAGTGCTTTGGATTACATGCACAATGTTATGAATCCAAGTTATGTGCATAGAAATGTGAAGAGTAGGAACATCTTTTTAGATGAAGAATTTGGTGCTAAGATAGGTAATTTTGGTATGGCAAGTTTTGTTGAGAATGAAACCGAGGATTCTCGATTTTATTCAACTAATTATGCTTCTTGGAGTATTGGTTATTTAGCACCTGAATATGTTCATCAAGGTATAGTTTCAACAAGCATTGATATATTTGCTTATGGTGTTATTTTGTTAGAAATTTTATCTGGTCAAACACCAATAAGTGGATCAAGTGATAGAGGTGAAGGAAGTGTTTGGCTTAGTGATAAAATAAAAACTACTTTTATGTCAGAAAATAATGTGAATGAATTGTTAAGGGAATGGATTGATAGTGCATTAGGGGATAATTACTCATTTGATGCAGCTTTAGAAGTGGCTAATATTGCAAGAGCTTGTGTTGAGGAAGATTGTTCTTTGAGGCCTAATGCAAGAGAGATTGTTGAGAAGATTTCAAGATTGGTGGAGGAATTACCAAATGAGGAACATCAAATTTTGATGAGTGAAAGCTCTTGCAAACCTCTTGTGGAAGGACTAGGAAGCAATATGTGA 2103 0.3433 MGTVEMMITFHMKTLVFFLCLFLSSFGENLLTCETTSPHDSIYHCNENESQNHHCETFALFFTNSHYSSLSNLTLYLGLNKFIIAETNGFSAETEFLPYNHPLLVPIDCKCKKSGFFQAELTKTTIKGENFYDISQSLEGLTTCKGIKDSNIGVSPWNLDSKLKLIVPLKCACPFSSFVIPKPKFLLSYPLSQNDTISNLALKFNISKEAIVSANNFSSSSSSSEEEILRTRSLEPFTSILIPLNEKPFLFLDPLAKPRQPNSDFPRTNNISINSPHKKSRMRKSEVYIGLIGVAIGVFFALVVAFFFMWLKQKKVEENSCKERDLELQHLNLSVRTTSDKKVSFEGSQDTLESKIIDATTPRKMLLETYTIEDLRKATEDFSSNCHIDGSVFHGCLNGKNLAIKRIKTEMVSKLNLGLFHDANHHHPNIINLLGTSISEGSSDSESFLVFEYAKNGSLKDWLHGGLAIKNQFIASCYCFLNWDQRLRICLDVASALDYMHNVMNPSYVHRNVKSRNIFLDEEFGAKIGNFGMASFVENETEDSRFYSTNYASWSIGYLAPEYVHQGIVSTSIDIFAYGVILLEILSGQTPISGSSDRGEGSVWLSDKIKTTFMSENNVNELLREWIDSALGDNYSFDAALEVANIARACVEEDCSLRPNAREIVEKISRLVEELPNEEHQILMSESSCKPLVEGLGSNM* 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2753 700 Gene3D Transferase(Phosphotransferase) domain 1 454 689 - -
Tpr6g2753 700 ProSiteProfiles Protein kinase domain profile. 372 683 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2753 700 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 7 694 - -
Tpr6g2753 700 PANTHER PROTEIN LYK2 7 694 - -
Tpr6g2753 700 Gene3D Phosphorylase Kinase; domain 1 355 453 - -
Tpr6g2753 700 SUPERFAMILY Protein kinase-like (PK-like) 367 666 IPR011009 -
Tpr6g2753 700 Pfam LysM domain 193 220 IPR018392 -
Tpr6g2753 700 ProSiteProfiles LysM domain profile. 187 242 IPR018392 -
Tpr6g2753 700 Pfam Protein kinase domain 390 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2753 Tpr-Chr6 30052543 30056049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2753 43 694 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 40.059 3.13e-147 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Tpr6g2753 Pkinase 4.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2753 - - gmx:100816082 970.689