Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2706 ATGGACTCACCTGTTGATGGAGTTGAGTGTTCACCAGAAGTTTATAATAATTCTGTTTCTGGCGTAATGGATCACAATCCTCCTTCGACATCTGGTGTTCCGGGCTCTTCCCGACCGCCTTTAATGGCATCATCTAGAAGAACTCAAGGAAGGATGAAAGACTCTTATCAGGAACCTAATGATGTGAGCCGTGCCGATACTTTTGAAAGTTGTTTGGCAAAGAATATTTCCAATATCGAAACAAAATTGTGTATTAGTGATGATTCCACTAATCACAACTCCGACGAGATATTAGAATCTGACATATTAGGTTCGTCAAAAGGATTTGCGGATCAGACAAACTCGGAGATTATGTTTTGCTCAAGTCCTCAGAGTAGTTTTTATTCTGCCGCTGCTTATTCAGAAGCCAAAGAAAGTTTCACTAATACCGGAATCAAGGAATCTGTTAGTGTTGATAAGTCGGTTGAAAGCGGGGAGGTTACTAATTCGGGGGAGAGCAGGAAGACGAGTATCTGTAGAGGGAGTACTGGAAGTGACGTTAGCGATGAAAGCAGCATCAGTAGTTTGAGCAGTTCTTTGTATAAACCACATAAAGCGAATGATGTAAGATGGGAAGCAATTCAAGCTATTCGAGTTCGAGATGGTGGATTGGAAATGAGACATTTCAGGTTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCAGAATTAAGTAGCACAAAGACTTGTTTTGCTATGAAAGTGATGAACAAGACTGAATTGTCGAGTCGTAAGAAGCTTCCGAGGGCTCAGACAGAAAGAGAGATATTGCAGTCTCTAGATCATCCATTTTTACCTTCATTGTACACACACTTTGAGACGGAGTCATTCTCTTGCTTGGTTATGGAGTTTTGTCCTGGTGGGGATCTCCATGCTCTCCGGCAACGACAACCTGGGAAGTATTTTTCAGAACATGCTGCAAGGTTTTATGTGGCAGAAGTTCTCCTTGCTTTGGAGTATTTGCACATGCTCGGAATCATCTACAGAGACCTCAAACCCGAGAACGTGTTGGTGAGAGAAGATGGTCACATAATGCTATCAGATTTCGACCTCTCTCTAAGGTGCGCCGTCAGTCCAACTCTAGTAAAATCAGCAAATTCTAACTTAGAGACAAAAAGCTCAGGATACTGCGTTCAACCCGCTTGCATCGAACCAACTTGTGTTATTCAGCCAGACTGCATCAAACCTTCTTGTTTCACGCCACGTTTTCTACAAAGCAAGTCCAAGAAGAAAGAAAAGAAGTTGAAACCTAAGAATGATGTGCACAATCAGGTGACACCTCTGCCCGAGCTTATGGCCGAGCCCACAAATGCCCGATCAATGTCCTTCGTAGGCACGCACGAGTACCTTGCGCCTGAAATCATCAAAGGTGAAGGTCATGGAAGTGCTGTAGACTGGTGGACATTTGGGATATTCTTATACGAGCTTTTGTTCGGTAGAACGCCATTCAAAGGTTCAGCAAATCGGGCAACTTTATTTAATGTAGTTGGGCAGCCCTTAAGATTTCCGGAATCTCCAAGTGTTAGCTTTGCTGCCAGGGATTTGATTAGGGGTTTACTTGTGAAAGAGCCTCAGCATCGTCTTGCCTATAGACGCGGAGCTACAGAGATTAAACAACATCCATTCTTTCAAAATATTAACTGGGCGCTGATCCGTTGCGCCACTCCTCCGGAAGTGCCAAGACAGGCCATGAAAGCAGCCCTCACACCTGAGAAGAAACCGCCTGGAGTGAAGCCTGCTGGTAACTATTTAGATATTGATTTCTTTTGA 1821 0.436 MDSPVDGVECSPEVYNNSVSGVMDHNPPSTSGVPGSSRPPLMASSRRTQGRMKDSYQEPNDVSRADTFESCLAKNISNIETKLCISDDSTNHNSDEILESDILGSSKGFADQTNSEIMFCSSPQSSFYSAAAYSEAKESFTNTGIKESVSVDKSVESGEVTNSGESRKTSICRGSTGSDVSDESSISSLSSSLYKPHKANDVRWEAIQAIRVRDGGLEMRHFRLLKKLGCGDIGSVYLAELSSTKTCFAMKVMNKTELSSRKKLPRAQTEREILQSLDHPFLPSLYTHFETESFSCLVMEFCPGGDLHALRQRQPGKYFSEHAARFYVAEVLLALEYLHMLGIIYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKSANSNLETKSSGYCVQPACIEPTCVIQPDCIKPSCFTPRFLQSKSKKKEKKLKPKNDVHNQVTPLPELMAEPTNARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGRTPFKGSANRATLFNVVGQPLRFPESPSVSFAARDLIRGLLVKEPQHRLAYRRGATEIKQHPFFQNINWALIRCATPPEVPRQAMKAALTPEKKPPGVKPAGNYLDIDFF* 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2706 606 PANTHER FLIPPASE KINASE 1-RELATED 61 606 - -
Tpr6g2706 606 ProSitePatterns Serine/Threonine protein kinases active-site signature. 343 355 IPR008271 GO:0004672|GO:0006468
Tpr6g2706 606 Pfam Protein kinase domain 223 375 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2706 606 Pfam Protein kinase domain 457 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2706 606 SUPERFAMILY Protein kinase-like (PK-like) 196 580 IPR011009 -
Tpr6g2706 606 ProSiteProfiles Protein kinase domain profile. 222 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2706 606 MobiDBLite consensus disorder prediction 13 50 - -
Tpr6g2706 606 Gene3D Transferase(Phosphotransferase) domain 1 308 577 - -
Tpr6g2706 606 CDD STKc_phototropin_like 220 580 - -
Tpr6g2706 606 Gene3D Phosphorylase Kinase; domain 1 215 307 - -
Tpr6g2706 606 MobiDBLite consensus disorder prediction 152 186 - -
Tpr6g2706 606 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL3 61 606 - -
Tpr6g2706 606 SMART serkin_6 222 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2706 606 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2706 Tpr-Chr6 29665504 29669830 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2706 165 606 AGC Kinase Gene Family AT5G47750 75.711 0.0 696
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Tpr6g2706 Pkinase 3.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2706 K08286 - gmx:100802402 909.827