Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tpr6g2696 ATGAGTTCCAAAAAGAACACTCCATCACATGTTATTCTCTTGTCTCAAATACTTGTAATCATGTCATGTTTACTTTCTAACTCATATTCAGACCCAAGAATCTCACAAGCTGGTCTCTACTGTGGTAAACAAAAAGCACCACCAAAATCAAACTATATCCCAAGTTTCATACAAGAAATGGAGAATCTATCACAGCTTGTAACAAACCATAATTGGGGAACTCACTTTGTCAATATTTCAGGATCTGTTCCAATTTATGGCTTTGCACAATGTTTTAAAGATCTCTCTCATACTGATTGTCTTCTTTGTTATGCCGCAAGCCGGACTAAGCTCCCTCGTTGTCTCCCTTCGATCTCTGCTCGAATATATCTCGATGGTTGCTTCCTTCGATATGATAATTATAGTTTCTACTTGGAGGAAACTGACCCTTTGAGGGACAGTGTTACCTGCACCTCGACCTCTGAGAGGTTGGAGGTGCAGATAGAAAAGAATATTGAAAAAGTGATTGATGTTGTGGCCGGGGATGCGGTTGATGGTGGTGGTGGATTTGCTACGAAAGAAGTCGAGGGTGTTTACGCCTTAGCGCAGTGTTGGAACACTCTTGGGATTCATGGTTGTAGAGATTGTTTGAAGGATGCTGTGGAAAAAGTAAGAGGTTGTTTGCCAAATAAGGAAGGTAGAGCCTTGAATGCTGGTTGTTATTTAAGATATTCAACACACAACTTTTTCAATGAAGTTGTAAAAGATGGTGGGAATGAATCTTTAAGCAAAGGAGCTGTAATAGCAGTAGTGTTAGCAACAGCTGCAATCATCATGCTTGCTCTCTCTGCCTCTTTTGCAGTGTTCAAAAAATTGTCAAATCTAAAAAAAGAAAAAAATAACCTGGATCAAATTTCATCATCCATAACAAAATCTAGTTTGAATTACAAATATGAAATCCTCGAGAAAGCTACGGATTATTTCAATTCTTCTCGGCAAATAGGTCAAGGAGGATCAGGTTCAGTTTTCAAAGGTATTCTCCCTAACGGAAACGTCGTTGCAGTAAAGAGATTGGTGTTCAATAATAGGCAATGGGTGGATGAGTTCTTCAATGAAGTAAATTTGATTAGTGGAATTGAACACAATAATCTTGTCAAATTATTGGGTTGTAGCATTGAAGGACCTGAGAGTTTACTTGTATATGAGTACTTTCCCAACAAGAGTTTAGATCAATTTCTATTTGAAAATAGCAGAACTCAAATTCTAAATTGGAAGCAGCGGTTTAACATTATTCGTGGAACAGCAGAAGGGCTTGCATATCTTCATCAAGGAACAAAAAAACGAATCATCCATAGAGATATCAAAAGCAGCAATGTTCTTTTAGATGATAATCTTTCTCCTAAGATTGCAGATTTTGGCCTTGCGCGTTGTTTTGCTGCGGATAAAACACATTTGAGTACTGGAATTGCTGGAACACTTGGTTACATGGCTCCAGAGTACCTAATTCGAGGACAACTTACAGATAAAGCTGATGTCTATAGTTTTGGAGTACTTGTCCTAGAGATTGTAACTGGCAGAAGAAATAATGTCATCAGAGAGGATTCTGGATCACTTCTACAAACTGTTTGGAAACTTTACAGATCAAACACATTGGTTGAGAGTGTTGATTCAAGCTTAGGAGATGATTTTCCTGAAGCTGAGGCATCAAGAGTGGTTAACATTGGTTTGCTTTGCACACAAGCTTCTGCTGCTCTTAGGCCATCAATGGACGAAGTTGTGCAAATGTTAAGAAATTCAGAATTAGATGTTCCTACACCAAATCAACCACCATTTCTGAACACTGCAACGCTAGACTCAGATAGCTCCATTAGGTCTTGTAGTACAAACAGCTTTGTATCCAATGCTTTAAGAAGGATTGGAGTTTCACACAGTTACTCAGAGTCCTCGAACGAGCCATCGATAAGCGAAGAACCAACTGTCTAA 1962 0.3874 MSSKKNTPSHVILLSQILVIMSCLLSNSYSDPRISQAGLYCGKQKAPPKSNYIPSFIQEMENLSQLVTNHNWGTHFVNISGSVPIYGFAQCFKDLSHTDCLLCYAASRTKLPRCLPSISARIYLDGCFLRYDNYSFYLEETDPLRDSVTCTSTSERLEVQIEKNIEKVIDVVAGDAVDGGGGFATKEVEGVYALAQCWNTLGIHGCRDCLKDAVEKVRGCLPNKEGRALNAGCYLRYSTHNFFNEVVKDGGNESLSKGAVIAVVLATAAIIMLALSASFAVFKKLSNLKKEKNNLDQISSSITKSSLNYKYEILEKATDYFNSSRQIGQGGSGSVFKGILPNGNVVAVKRLVFNNRQWVDEFFNEVNLISGIEHNNLVKLLGCSIEGPESLLVYEYFPNKSLDQFLFENSRTQILNWKQRFNIIRGTAEGLAYLHQGTKKRIIHRDIKSSNVLLDDNLSPKIADFGLARCFAADKTHLSTGIAGTLGYMAPEYLIRGQLTDKADVYSFGVLVLEIVTGRRNNVIREDSGSLLQTVWKLYRSNTLVESVDSSLGDDFPEAEASRVVNIGLLCTQASAALRPSMDEVVQMLRNSELDVPTPNQPPFLNTATLDSDSSIRSCSTNSFVSNALRRIGVSHSYSESSNEPSISEEPTV* 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tpr6g2696 653 ProSiteProfiles Gnk2-homologous domain profile. 34 136 IPR002902 -
Tpr6g2696 653 ProSitePatterns Protein kinases ATP-binding region signature. 327 349 IPR017441 GO:0005524
Tpr6g2696 653 SUPERFAMILY Protein kinase-like (PK-like) 304 616 IPR011009 -
Tpr6g2696 653 SMART serkin_6 321 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2696 653 Pfam Protein tyrosine and serine/threonine kinase 324 589 IPR001245 GO:0004672|GO:0006468
Tpr6g2696 653 Gene3D - 147 242 IPR038408 -
Tpr6g2696 653 Gene3D - 36 136 IPR038408 -
Tpr6g2696 653 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Tpr6g2696 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 42 21 650 - -
Tpr6g2696 653 Pfam Salt stress response/antifungal 160 239 IPR002902 -
Tpr6g2696 653 Pfam Salt stress response/antifungal 44 134 IPR002902 -
Tpr6g2696 653 Gene3D Transferase(Phosphotransferase) domain 1 397 598 - -
Tpr6g2696 653 ProSitePatterns Serine/Threonine protein kinases active-site signature. 442 454 IPR008271 GO:0004672|GO:0006468
Tpr6g2696 653 ProSiteProfiles Protein kinase domain profile. 321 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tpr6g2696 653 CDD STKc_IRAK 327 589 - -
Tpr6g2696 653 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 21 650 - -
Tpr6g2696 653 Gene3D Phosphorylase Kinase; domain 1 281 396 - -
Tpr6g2696 653 ProSiteProfiles Gnk2-homologous domain profile. 143 242 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tpr6g2696 Tpr-Chr6 29564072 29568066 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tpr6g2696 3 486 Receptor kinase-like Gene Family AT5G40380 54.918 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Tpr6g2696 PK_Tyr_Ser-Thr 4.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tpr6g2696 - - gmx:100790404 942.954